| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1326 |
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| Symbol | |
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| ID | 8252426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1578845 |
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| End bp | 1579687 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934980 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003091603 |
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| Protein GI | 255531231 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.482923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTTT CGGAAGTTAT CAGCCAATTA AGGCCAACCC TAAAAACTTA TGCCTATCAT
ATTTGTGGCT CTTTAGCCGA TGCAGAGGAT GTAGTGCAGG ATGTATTGCT GAAGTTTTTG
GCTCTGGATC AGGAAAATAT TGAGCATGTC AGGGCTTACC TCATCAGAAT GGTGATCAAC
CATGCAATCA ATCAAAAGAA AAAACTAAAG AAGCAGGCAC TGGATTATCC CGGAGAGTGG
CTTCCCGAAC CGGTGGCTAC AGAAAAAGCA GATGCCGGAA TTAACCGGAA AGAAATCCTT
TCCTATTCGC TGATGGTACT TTTAGAAAAG TTAAACCCCA GACAGCGGGC GGTATTTATT
TTAAAGGAGG CTTTTGATTA TGAGCATGCT GAAATTGCAA ACGTACTGGA TATTAAGCCC
GATCTTTCCA GACAGCTACT TGCAAGAGCG AAAAAAAGCA TTGGGAACCC AAAGCTGCTG
CCTGACCGGG TGCCGCAATC TTTTTTAGGC AGGTACCTGA GTGTTCTGCA GTCTGGTGAT
ATGCAGTGCC TGGAGAATTT ACTGAACGAG GATATTGTAT CGGTATCGGA TGGTGGCGGT
AAAGCCAGGG CGGCCATTAA GCCGGTGCAT GGCAGAAAGT CTGTAGCCGC CCTGTTGATG
GGCCTTTATA CCAAATTTTA TGAGGATTCT ATTATCGTTG AAGGCTTTGT TAACCAGGAA
CCAGCTTTGT TTTATTACCA GGGCGACAAA TTGGTTACCT GTATTACTTT TGTCCTTACA
GCAGGGCAGA TCATCCGTAC GTTTATCATC AGGAATCCGG ATAAACTGAA AAATTTAAAT
TAA
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| Protein sequence | MTFSEVISQL RPTLKTYAYH ICGSLADAED VVQDVLLKFL ALDQENIEHV RAYLIRMVIN
HAINQKKKLK KQALDYPGEW LPEPVATEKA DAGINRKEIL SYSLMVLLEK LNPRQRAVFI
LKEAFDYEHA EIANVLDIKP DLSRQLLARA KKSIGNPKLL PDRVPQSFLG RYLSVLQSGD
MQCLENLLNE DIVSVSDGGG KARAAIKPVH GRKSVAALLM GLYTKFYEDS IIVEGFVNQE
PALFYYQGDK LVTCITFVLT AGQIIRTFII RNPDKLKNLN
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