Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1204 |
Symbol | |
ID | 8252302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1424949 |
End bp | 1427156 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644934859 |
Product | RelA/SpoT family protein |
Protein accession | YP_003091484 |
Protein GI | 255531112 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.442977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATG CATTAGTTAT TGATTTAGAA GCAGAAAAGC AGGAGATACT GAAAAGATAC CGTGCCCTTT TGCGTGCTTG TAAGCCAACA ATGCAAAGAG GGGATAAAAA GGAAATCAGG AAGGCTTTTG ACATGGCATT GGAGAGCCAT AAAAACATGC GGAGAAAATC CGGGGAGCCT TACATCTATC ATCCAATTGC TGTGGCCCAG ATTGCAGCAG AAGAAATTGG GCTGGGCACC ACGTCCATAG TATGTGCGCT ATTGCACGAT GTGGTGGAAG ATACAGACAT TACGCTGGAG GACATTGAGC GGGAGTTTGG TAAAAAGACA GCAAAAATTA TTGATGGGCT GACAAAGATC TCGGGTGTTT TTGACTATAA CAGCTCTTTG CAGGCAGAGA ATTTTAGAAA AATGTTGCTG ACCCTGGCAG ATGATGTAAG GGTAATCCTG ATTAAACTGG CCGACCGGCT GCACAACATG CGTACCATGG ATTTTATGCC GAGGCAAAAA CAGCTTAAAA TTGCATCTGA AACCATTTAC CTGTATGCAC CACTGGCGCA CCGTTTAGGA TTGTACGCCA TTAAGTCTGA GCTGGAAGAC CTTTCCATGA AATACCTGGA ACCGGATACC TATAAGTACA TTGCCACTCA GCTGAACGAG AAAAAAGCAG AACGGACACT GTTCATCAAA AGATTTGTGG AACCGATCAA CGAGATCCTG GCAGAACAGG GCCTGACAGC TGATATCTAT GGCCGGCCAA AGTCCATCCA TTCCATCTGG AACAAAATGA AAAGCAAAAA CATACCTTTT GAGGAAGTGT ATGACCTTTT TGCCATCAGG ATTATTCTGG ACAGCCCGCC TGAAAATGAA AAAGCAGATT GCTGGAAAGC CTATTCGATT GTGACCGACC TTTACCGGCC CAATCCCGAC CGTTTGCGCG ACTGGGTATC ATCGCCCAAA GGAAACGGAT ATGAATCGTT ACATACCACA GTAATGGGCC CTAAAGGGCA ATGGGTTGAA GTACAGATCC GTACGCAGCG CATGAACGAA ATTGCAGAGA AAGGCTTTGC TGCGCACTGG AAATATAAAG AGTCGAGCAA CGACAACGGA CTGGATCAGT GGATCATGAA AGTAAGGGAA ATGCTGAACA ACCCGGAAGC CAATGCTTTA GATTTTCTGG ACGATTTTAA AATGAACCTC TTCTCGGATG AGATCTTTAT TTTTACACCC AAGGGCGCTT TGCTCCAGCT GCCATTGGGC GCTACTGCGC TCGACTTTGC CTTTGAGATC CATACAGATG TAGGCGCAAA ATGTATCGGG GCCAAGGTAA ACCATAAACT GGTGCCCCTG TCTTATAAAT TGCAGAACGG CGACCAGGTA GAGATCATTA CCTCCAGCAA GCAATCCCCA AAAGAAGACT GGCTCAATAT CGTTGTTACT GCCAAGGCAA AATCAAAGAT CAAATCTTCT TTAAAAGAAG AAAAGAGAAA AATTGCCGAA CTGGGCAAGG AAACACTGGA ACGTAAGCTG AAATCATTAA AGATCACCTA CAACACCGAT AATTTAAATA AACTCAGCTA CTTCTTTAAG CTGCCTTCTA CCCAGGAACT GTTTATTGCG GTGGCAAAGG GAAAAATTGA ATTAAAAGAC CTGAAAGATT ACCTGGCCAG TGAAAAGGAA ATAGAGAACC GTGGTGCCGA GAAAAATGAG CACCAGCAGA TAGATGCGCT GCTGAACAAG GTAAAAGGAC CTGAATCGGA CATTTTACTG ATTGGCGAAG ACCTGCAAAA AATAGATTAT ACACTGGCAG CCTGTTGTAA CCCAATTCCG GGTGATGATG TTTTTGGTTT TGTAACCGTT AATGAAGGCA TAAAAATACA CCGCACCAAT TGCCCGAATG CGGCACAGCT GATGGCGAAC TATGGTTATC GGGTGGTTAA AGCAAAATGG AACAGACAAA AAGAGCTTAC TTTCCTGACC GGGCTGCACA TTATAGGTAT TGATGATGTG GGGCTGATCA ATAACATCAC CAAGGTGATC TCGAACGATT TTAAGGTAAA TATGCGCTCT ATAACTGTAG ACACTGATAA TGGGATCTTC GATGGCTCTA TCATGATCTT TGTAAACGAC AAGGACCACC TGGACAACCT GATTAAAAAT CTGTTAGAAG TTAAAGGGGT AACGGGAGTT ACACGTTTTG ATGCCTAA
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Protein sequence | MKNALVIDLE AEKQEILKRY RALLRACKPT MQRGDKKEIR KAFDMALESH KNMRRKSGEP YIYHPIAVAQ IAAEEIGLGT TSIVCALLHD VVEDTDITLE DIEREFGKKT AKIIDGLTKI SGVFDYNSSL QAENFRKMLL TLADDVRVIL IKLADRLHNM RTMDFMPRQK QLKIASETIY LYAPLAHRLG LYAIKSELED LSMKYLEPDT YKYIATQLNE KKAERTLFIK RFVEPINEIL AEQGLTADIY GRPKSIHSIW NKMKSKNIPF EEVYDLFAIR IILDSPPENE KADCWKAYSI VTDLYRPNPD RLRDWVSSPK GNGYESLHTT VMGPKGQWVE VQIRTQRMNE IAEKGFAAHW KYKESSNDNG LDQWIMKVRE MLNNPEANAL DFLDDFKMNL FSDEIFIFTP KGALLQLPLG ATALDFAFEI HTDVGAKCIG AKVNHKLVPL SYKLQNGDQV EIITSSKQSP KEDWLNIVVT AKAKSKIKSS LKEEKRKIAE LGKETLERKL KSLKITYNTD NLNKLSYFFK LPSTQELFIA VAKGKIELKD LKDYLASEKE IENRGAEKNE HQQIDALLNK VKGPESDILL IGEDLQKIDY TLAACCNPIP GDDVFGFVTV NEGIKIHRTN CPNAAQLMAN YGYRVVKAKW NRQKELTFLT GLHIIGIDDV GLINNITKVI SNDFKVNMRS ITVDTDNGIF DGSIMIFVND KDHLDNLIKN LLEVKGVTGV TRFDA
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