Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1193 |
Symbol | |
ID | 8252291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1413420 |
End bp | 1415921 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644934848 |
Product | ATP-dependent protease La |
Protein accession | YP_003091473 |
Protein GI | 255531101 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCAG ATTGTCGTTT TTTATTTAGA AAGACTTATT TAATGAGTAA ACAAGATCCG TTCGATTTTA GCAATGCATT ACCTATCATA AACGAAGACA CTGAATTCTT TCCATTGATG TCCCAACAGG ATGAAGATGA GATGAATAAT GAGGATACCC CTGAAATTCT GCCTATACTT CCACTCCGGA ACACGGTGCT TTTTCCGGGT GTGGTTATCC CCATTACTGT GGGCCGCGAC AAATCTATCA AACTTATAAA GGAAGCCTAC AAAGGTGACA GGATCATTGG CGTGGTCTCC CAGCGTGACG TTTCTATCGA AGACCCTACA TTTGAGCAGT TGAACAGTGT AGGTACCGTT GCCCATATCA TCAAAATGCT GCAAATGCCA GATGGCAACA CTACGGTAAT TATTCAGGGA AAACAACGTT TCCGCTTACT GGAAGAGGTA CAATCTGAGC CTTATATTAA AGTTACCATC AGCAAATTTG CCGAGACCAA GCACAAATCC GATAAAGAAT TTAAAGCATT GGTGGCCTCT ATCAAGGAAA TGTCTGCCCA GATCATCCAG CTATCGCCTA ATATTCCAAG CGAGGCCGGA ATTGCATTAA AAAACATAGA AAGCACCTCT TTTTTAATCA ACTTCATCTC TTCTAACATG AATGCAGATG TAACTGATAA ACAAAAGATG CTGGAAATGA CAAACCTGCG CGAACGTGCC ATGATGGTAA TGGAGCTGCT TACCCTGGAA CTTCAGATGC TGGAACTTAA AAACCAGATC CAGTCGAAAG TACGTACCGA CCTCGACAAG CAGCAAAGGG ATTATTTCCT GAACCAACAG TTAAAAACCA TTCAGGAAGA ACTGGGAGGC AACTCTTCCG ACCTGGAATA CGAAGCGCTG GAAAGCCGCG CAAAAAAGAA AAAATGGGAC ATTCATGTTA AAGACCATTT TAACAAAGAA CTGGAAAAAC TGGGCAGAAT GAACCCTGCT GCCCCCGATT ATTCTGTTCA GATCAATTAC CTGGAACTGT TGCTTGACCT GCCATGGGGC GAGTTTACCA AAGATAATTT CGACCTTAAA CGTGCACAGC GTGTACTCGA CAAAGACCAC TTCGGACTGG AAAAGGTGAA GCAGCGCATT ATAGAATATT TAGCAGTATT GAAGCTAAAA CGTGACATGA AGGCCCCGAT TATTTGTCTG GTTGGCCCTC CGGGAGTAGG TAAAACCTCG CTGGGAAAAT CAATTGCCAA AGCGTTGAAC CGTAAATATG TGCGTATGGC CTTAGGAGGT ATCAAGGATG AGGCTGAAAT CCGTGGTCAT AGAAAAACTT ATATAGGGGC CATGCCGGGC CGTATTATAC AGTCGATCAA AAAGGCAGGT GCATCTAACC CAGTATTTGT ATTGGATGAG ATTGATAAAG TGGGCTCAGA CTTCAGGGGC GACCCTTCTT CTGCCCTGCT TGAGGTATTG GACCCGGAAC AGAACAGTGC TTTTAACGAC CATTATGTAG AAACAGATTA TGACCTGTCC AATGTCCTGT TTATTGCAAC GGCCAATTCA CTCAGTTCCA TCCATCCGGC ACTGTTAGAC CGTATGGAGA TCATTGAAGT AAACGGTTAT ACCATTGAAG AAAAGATAGA GATTGCCAAA AAATATCTTT TACCTAAGCA AAAAGAGCAA CATGGCATAA AAACAAAAGA TATTACCTTA AAAAATAATT TAATTGAAAA GGTGATTGAA GACTATACCA GGGAATCTGG TGTAAGGGGA CTCGAGAAAA AGATCGGCTC ACTGGTACGC GGTGTGGCCA CCAAAATTGC TATGGAGGAA AGCTATGATC CGGCACTTAG CCTGGATGAT GTAGAGCGCA TTTTAGGTGC CCCCCTTTAT GATAAAGACT TATACGAAGG CAATGAAGTA GCGGGTGTGG TAACCGGTTT GGCCTGGACA CAGGTAGGTG GCGACATTCT GTTCATTGAA GCCAGCTTAA GCCCTGGTAA GGGCAAACTG ACCCTTACAG GTAACCTGGG CGAGGTAATG AAAGAATCAG CTATTATTGC CTTAGCCTAT TTACGTGCCC ATGCCGAATT GTTTAACATA GATTATGCCC TGTTTGATCA ATGGGATGTG CATGTGCATG TTCCGGCAGG TGCAACACCT AAAGATGGCC CGTCGGCAGG GATAACCATG CTAACAGCAC TTACATCGGC CTTTACCCAG CGTAAAGTAA AATCTAACCT GGCAATGACT GGCGAGATTA CCCTTAGGGG AAAAGTTTTA CCTGTTGGTG GTATCAAAGA AAAGATCCTT GCGGCAAAAC GTGCCAATAT CAAAGACATT ATTTTATGTA AGTCGAACCG TAAGGACATT CTGGAAATTA AAGAAAGCTA TATCAAAGAC CTGAATTTCC ATTATGTTAC AGAAATGAAG GAAGTGATAG ACCTGGCCTT AACTAAAGAA AAAGTAAGGA ACCCGCAAAA TTTAACTGTA AAGCCCAAAT GA
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Protein sequence | MLSDCRFLFR KTYLMSKQDP FDFSNALPII NEDTEFFPLM SQQDEDEMNN EDTPEILPIL PLRNTVLFPG VVIPITVGRD KSIKLIKEAY KGDRIIGVVS QRDVSIEDPT FEQLNSVGTV AHIIKMLQMP DGNTTVIIQG KQRFRLLEEV QSEPYIKVTI SKFAETKHKS DKEFKALVAS IKEMSAQIIQ LSPNIPSEAG IALKNIESTS FLINFISSNM NADVTDKQKM LEMTNLRERA MMVMELLTLE LQMLELKNQI QSKVRTDLDK QQRDYFLNQQ LKTIQEELGG NSSDLEYEAL ESRAKKKKWD IHVKDHFNKE LEKLGRMNPA APDYSVQINY LELLLDLPWG EFTKDNFDLK RAQRVLDKDH FGLEKVKQRI IEYLAVLKLK RDMKAPIICL VGPPGVGKTS LGKSIAKALN RKYVRMALGG IKDEAEIRGH RKTYIGAMPG RIIQSIKKAG ASNPVFVLDE IDKVGSDFRG DPSSALLEVL DPEQNSAFND HYVETDYDLS NVLFIATANS LSSIHPALLD RMEIIEVNGY TIEEKIEIAK KYLLPKQKEQ HGIKTKDITL KNNLIEKVIE DYTRESGVRG LEKKIGSLVR GVATKIAMEE SYDPALSLDD VERILGAPLY DKDLYEGNEV AGVVTGLAWT QVGGDILFIE ASLSPGKGKL TLTGNLGEVM KESAIIALAY LRAHAELFNI DYALFDQWDV HVHVPAGATP KDGPSAGITM LTALTSAFTQ RKVKSNLAMT GEITLRGKVL PVGGIKEKIL AAKRANIKDI ILCKSNRKDI LEIKESYIKD LNFHYVTEMK EVIDLALTKE KVRNPQNLTV KPK
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