Gene Phep_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1192 
Symbol 
ID8252290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1412473 
End bp1413423 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content45% 
IMG OID644934847 
Producthypothetical protein 
Protein accessionYP_003091472 
Protein GI255531100 
COG category[S] Function unknown 
COG ID[COG3528] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.955633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACC AATTTCCGGC ACTTGTTATA TTGATCCTGT TGGGCACAGC TGCCTGTGCC 
CAAACTTATA AAAATGAGTT TGGCTTTCGC AGTGACAACG ATTCTTACCT GGCACAGGGG
TCAGACCGTT ATTATACCAA CGGTCTGTTT ATTTATTTTC GCCATGCCCT TAACCAGGAA
AAGCTGAACG ATAAACTGGA GAAAAAGACT TACGAGATCT CGGCAGGTCA GAAAATGTAC
AACCCCATGT CTGGTTATGC CCCCGATCCA GCCAGACAGG ACAGGCCTTT TGCCGGTTAT
TTATATGCGG GCGGGGCGCT GAGCTGGTTT CGCAAAAATG AAAGTATTTT AAAAATAAGT
GCTGAAGTGG GTACTACAGG TCCGAATTCA CTGGCCGAAG ACGGACAGGA ACTGTTACAC
GATGTAGTGG GTTTTTATGC GCTTGACGGC TGGCAGTACC AGATCAAAAA TGCAATAGCC
CTTAACCTCT CGGCCCAGTA CACCAAATTG CTGCACCGGG ACTCAAACAA TGCAACAGAT
TTCTCTGTTG AGGGTTACGC AAATGCAGGA ACAACATTTA GCGGGGCAGG TGCAGGTATT
TTATTCAGGG CTGGCGGATT GAACCAACTG TTCAATTCGG CCTATACCAA TGCTGTAATT
GGCCATAACC CAAAAACCAA AGGGCTGGTA AAAAGAGAGG TTTTCTTTTA TGCTAAACCA
CAGCTTAATT TTGTGGCTTA CGATGCCACT ATACAAGGCA GTATGTTCAG CAACAACGAT
CCGGTTACCT TCGGCGTAAA ACCCATAGTA TTTGCCCAGC AAATTGGCTT TAACTACAGT
TCACAGCGCT TTACCTTTGA TTTTGGGATG ATCTTCAAAA CCAAAGAAGT AAAAAGTACG
GCAAAGGCCC ATCAGTATGG GTCTATCAGT ATGTTTTACA GGTTTAATTA G
 
Protein sequence
MKYQFPALVI LILLGTAACA QTYKNEFGFR SDNDSYLAQG SDRYYTNGLF IYFRHALNQE 
KLNDKLEKKT YEISAGQKMY NPMSGYAPDP ARQDRPFAGY LYAGGALSWF RKNESILKIS
AEVGTTGPNS LAEDGQELLH DVVGFYALDG WQYQIKNAIA LNLSAQYTKL LHRDSNNATD
FSVEGYANAG TTFSGAGAGI LFRAGGLNQL FNSAYTNAVI GHNPKTKGLV KREVFFYAKP
QLNFVAYDAT IQGSMFSNND PVTFGVKPIV FAQQIGFNYS SQRFTFDFGM IFKTKEVKST
AKAHQYGSIS MFYRFN