Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1173 |
Symbol | pyrB |
ID | 8252271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1389914 |
End bp | 1390846 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644934828 |
Product | aspartate carbamoyltransferase catalytic subunit |
Protein accession | YP_003091453 |
Protein GI | 255531081 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTAG AAAAATTATC AACCCGACAT CTCTTAGGCA TCAAAGATAT TAACCGGAAT GATATCGAAC TGATCTTCGA GACTGCAGAT AATTTTAAAG ATGTGATTAA CCGGCCCATA AAAAGGGTGC CCTCATTAAG GGACATCACC ATTGCCAATA TATTTTTTGA GAACTCCACA CGGACCAAAC TTTCTTTTGA ACTGGCAGAA AAAAGACTTT CGGCCGATGT GGTCAACTTT GCTGCATCCT CATCTTCTGT AAGTAAAGGT GAAACGCTGA TAGATACTGT AAACAATATC CTGGCTATGA AAGTAGACAT GGTAGTGATG AGACACCCTT ATGCGGGTGC AGGTCAGTTT TTGAGCAGAC ACATTAAAGC CCAGATTGTA AATGCCGGCG ACGGTGCCCA TGAACACCCA ACACAGGCTT TACTGGATGC TTTTTCAATC CGGCAGAAGC TTGGCGATGT GGCCGGAAAA AAAGTAGTGA TCGTTGGCGA TATCCTGCAC TCCAGGGTAG CCATTTCCAA TATTCTTTGT TTACAAAAAT TAGGTGCCGA AGTAATGGTC TGCGGCCCCA CTACCCTGAT CCCAAAGCAC ATTGAAAGTT TAGGTGTAAA AGTTGAACAC AACCTGATCA AAGCCCTGAA CTGGTGCGAT GTAGCCAATA TGCTGCGCAT ACAACTGGAA AGACAGGACA TCAAATACTT CCCCTCTTTA AGAGAATATG CCATGATGTA CGGACTGAAC AAACAGATTC TTGACAATCT GGATAAAGAA ATTGTGATCA TGCACCCCGG ACCGATAAAC CGTGGCGTAG AGATCACCAG TGACGTAGCC GACAGCAAAC AATCCATCAT CCTGGAGCAG GTTGAAAACG GGGTTGCCGT ACGTATGGCT GTCCTGTACC TGCTGGCCGC CCAAAACGAC TAA
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Protein sequence | MAVEKLSTRH LLGIKDINRN DIELIFETAD NFKDVINRPI KRVPSLRDIT IANIFFENST RTKLSFELAE KRLSADVVNF AASSSSVSKG ETLIDTVNNI LAMKVDMVVM RHPYAGAGQF LSRHIKAQIV NAGDGAHEHP TQALLDAFSI RQKLGDVAGK KVVIVGDILH SRVAISNILC LQKLGAEVMV CGPTTLIPKH IESLGVKVEH NLIKALNWCD VANMLRIQLE RQDIKYFPSL REYAMMYGLN KQILDNLDKE IVIMHPGPIN RGVEITSDVA DSKQSIILEQ VENGVAVRMA VLYLLAAQND
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