Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1114 |
Symbol | |
ID | 8252208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1299206 |
End bp | 1300348 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644934765 |
Product | Alpha/beta hydrolase fold-3 domain protein |
Protein accession | YP_003091394 |
Protein GI | 255531022 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0657] Esterase/lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000135139 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCATTTT TTACAAATCA TTCTTTAACC TTCAACATTT TTATAACTGT AATAAATTTA TATTTGAAAT ATGAGTTTTG CATAAACATG AACCAACCAA CTATAAATAC CTCAAAACCT GCAAAAAGGC GTGGACTTAA AATACTGAGT TGGTTCTTCA GCGTTTTGTG TCTTTTGTTA TTACTAACTT ATATTGCTTT CCAGATAAGT CCCTGGCCTT CCGCTATGCT AATCCGTTAC GCTTTTAACA AAGGGGGTAA GGCAACAAAT CTTGCACTTG ATCGCTTTAC GCCCAAAAAC ATTTCCCAGG AACTCAATAT CCCTTATGCA GATATAAATA ATAAGGAGAC CAGGTTAGAT CTTTATTTCC CCCCTAAAGA TGAACACCAG GGCAATCCCG CCCCCCTTAT TATATGGATA CACGGAGGCG CATGGCTGGC CGGCAGTAAA AATGATGTAG GTAACTATTG TAAAATACTG GCAGGACAAA AATACATTGT AGCGGCGGTG GATTACTCCC TGGCACCTGG AAGTACCTAT CCAACTCAAT TGTTCCAGGT AAACCAGGCA CTCGCATTTC TGAAAAAAAA TGCCGGAAAA TTTAACATTG ACACTTCAAA ATTCATATTG GCAGGAGATT CCGGTGGTGC CCAGATGGCC GCACAAATGG CCGGAACAAT CAGTGATCAG GATTATGCCA AAGCAATAAA AATTAAACCC TCGTTAAATA GAAATCAACT TGCTGCTGTA TTGTTGTATT GTGGCGCTTA CGACATCAGT CAAGTAAATT TAAAGGGAAG CTCAGGCTGG TTTTTAAAAT CAGTGTTATG GTCGTTTACT GGAGATAAGC ACTTCATGAA CAATCCGGCT TTTAACGCCA TTTCCATCAC TGGAAAAGTA ACTCCGGCAT TCCCGCCTAC GTTTATTTCT GTAGGCAATA ATGATCCTTT AGCCGCTCAT TCCTATGCCT TGGCCTCAAG GCTCAACAAT CTTGGTGTAA AAGTAGATAG CTTGTTTTTT GCTAACGACC ATCAACCGGC ATTACCACAT GAGTACCAGT TTAACCTTGA GGGAAAAGAT GGGCAGCTCG CGCTGAAAAA GTCATTACAG TTTTTAGCGA AATATGTCAA TACCCCAAAC TAA
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Protein sequence | MAFFTNHSLT FNIFITVINL YLKYEFCINM NQPTINTSKP AKRRGLKILS WFFSVLCLLL LLTYIAFQIS PWPSAMLIRY AFNKGGKATN LALDRFTPKN ISQELNIPYA DINNKETRLD LYFPPKDEHQ GNPAPLIIWI HGGAWLAGSK NDVGNYCKIL AGQKYIVAAV DYSLAPGSTY PTQLFQVNQA LAFLKKNAGK FNIDTSKFIL AGDSGGAQMA AQMAGTISDQ DYAKAIKIKP SLNRNQLAAV LLYCGAYDIS QVNLKGSSGW FLKSVLWSFT GDKHFMNNPA FNAISITGKV TPAFPPTFIS VGNNDPLAAH SYALASRLNN LGVKVDSLFF ANDHQPALPH EYQFNLEGKD GQLALKKSLQ FLAKYVNTPN
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