| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1098 |
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| Symbol | |
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| ID | 8252192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1283489 |
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| End bp | 1287007 |
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| Gene Length | 3519 bp |
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| Protein Length | 1172 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644934749 |
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| Product | hypothetical protein |
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| Protein accession | YP_003091378 |
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| Protein GI | 255531006 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00467719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000319304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCTCCGTA TCATGAAATT ATATCAGAAT TTAACGCCCC AAAGGGCATG GAAATATATC
GCTGTTTGCT TAGTGGCAGG TTTTACCAGT TCAAATGCCC AGCACCTTAC GCTGAACACT
TACAGCAACC AGACTGAAAT TAAAGCTACC GGGAGTATAA CGCTGACGGA TGGATTTTAC
ATCCCTGCGG GCAAGAATGT AAGGATCTTT ACCGGGGCGA GTTTCCAGCA ATGTGTGGAC
CTGGTAAGTA CCCCAAGTGC AGATCAGAAT TACATCAGTA CCAAGGTATT TAAAAAAGAA
GGGGTAAATG AAGGGAACAT CAATGCCACA CTGAGTACCT GCGAGGTAAA CCAGACCGTA
CAGTATTTTG ATGGATTGGG CAGGCCTTTG CAAACGGTGA CGGTACAGGG CAGTCCCGGC
TTTAAGGATG TGGTGCAGCC TGTTGACTAT GATGCCTTTG GCCGGGAGCA GTTCAAATAC
CTGCCTTACT CTACTGTTAC AGGTGCCAAT GGCAGCTTTA AGCCTTCTGC AATAACCAGT
CAGGCAGGTT TTTACAACAG CCCCCCGGCA GGTGTGGCCA CGATTACAAA CACGGCCTTT
TCAGAGAGCA GGTTTGAAGC CTCACCATTG AACCGGGTAC TGGAACGGGG ATCCCCCGGT
GCCAGCTGGC AGCTTAGTGC CGGTCATACC CAGAAAATGG AGTACGGCTC CAACAACAGT
ACAGACTATG CAGTACGGTT GTATCAGGCT GTACCCTCTG CAACCCCCGG AGAAGAACAC
AAACGGATAC TCAGCGGAAC AGGTTATTAC ACTGCCAATG AACTGTACCT GAGCATCAGC
AAGGACGAGA ACTGGGCAAG TACCGATGGC AAAGCCGGTA CCACAGAAGA ATATAAGGAC
AAAGAGGACA GGGTAGTGCT GAAGCGTGTA TTTAATTATA AAAATGATGT GACTGAAACC
CTAAGCACCT ATTATGTGTA TGATGACCTG GGGAACTTAA GTTTTGTGCT GCCACCAGGT
GCAAACCCGG ATGCCCTGGC CCTGCCTTCC CAGACACTGC AGGACCAGTT CTGTTACCAG
TACCGTTACG ATGGGCGTAA AAGGCTGATT GAAAAGAAGC TTCCGGGCAA GGACTGGGAA
TACATGGTGT ACAACAAACT GGACCAGCTG GTGCTGAGCC AGGACTCCTT GCAAAGGGTA
GCTAACCAGT GGCTGTTTAC CAAATACGAT GCTTTGGGCA GGGTAGCAAT TACCGGTGTA
TACGGAGATG GGGCTTCCAG GAGCAGCCTG GCCGGTACAT TGAACAGCCA GAGCGTACTT
TGGGAAAACA GGCTGGGTAG CGGGACCGAT TATGACAACG GTTCATTCCC TCAGAACAAC
ATTGCCTGGT ACCATACGAT CAATTACTAC GACGATTACA ATTTTCCGGG CAATAGCTTT
CCCCAGCCTG ACGGGGTTAC CCAGATGTCG GCCTCCAGGG TAAAAGGACT GCAGACGGGC
AGTTTTGTTT ACCAGGTGAA CAGCAGTACC CGTTACCTGA GCGTGAACTA TTATGACAAA
GATGGCCGGG TGCTCAAAAC AGCAGCAGAG AACCATTTGG GCGGTACAGA CCTTACGGAG
AATACCTGGA ACTTTGCCGG TGAGCTGACG GGCAGTACCC GTACCCATAG TAGTGGCTCG
GGCCCAGCCA CTACTATTGC CACCCGGCAT GAATACGACC ATATGGGAAG GAAGAAGGCG
ACCATGGAAT CCATTAACGG TCAGCCTGAA GTGGTGCTGA GCAAGCTGGA CTACAATGAA
CTGGGGCAGC TGAGCAAAAA ATGGCTGCAC AGTACAGATG GGAATACCTT TTTGCAACAT
ACGGATTATG CCTATAACGA ACGGGGCTGG CTGAAGCGGA GCATTTCAGG CGAGTTTAGC
ATCAGGCTTG GTTATGACAC CCTGGGTACT CCACAGTACA ATGGCAATAT TACGAGCCAG
GAATGGGGCA CTGGCTATAC CTTTCCGAGC ATTTACAATT ATGGATACGA TAAGCTGAAC
CGTTTGCTGA GCGGGGTAAG TACCGGGGCG ATATCGATGA GTGAAGTGCT GAGTTATGAT
GTGATGGGCA ACATCAGTAC CCTGAACAGG GATGGAGCAG GAGCGGGCAG CTATATTTAC
GAAGGCAACA GGCTGAAGAG CATCTCAGGT GGCGGGCTGG CTGCCGGGAG TTATGCCTAT
GACGGGAATG GGAATGCGGT TACCGATGGG CGTACCGGTG TAAACTTAAC CTATAACCAC
CTGAACTTAC CCATCACTGT TAATGGATCG GGACTGAACA TTGCCTATAC CTATGATGCA
ATGGGCAGGA AACTGAAAAA GGTGAGTAAC ATGGAGGCCC CTTCAGATTA TGTGGATGGG
GTACAATACA CCGGAGGGGC AATAGAGTTC ATCATGACCG AGGAGGGTAA AGCGAGGAGC
AATGGTGGTA CCTACAGCTA TGAGTATAAC CTGACAGACC ATTTGGGTAA TGTGCGGTAT
ACGTTCTACC AACACCCATC ATTGGGTACC TTACAGCCGC TTCAGGCAGA TGATTATTAC
GCTTTTGGTA AACAAAGAGT TGCAAGTGCA GGAGTGAATA AATATCTTTA CAATGGCAAG
GAGTTGCAAA GTGAGCTGGG ACAGCTCGAT TATGGCGCAA GGTTCTATGA TCCGGTGATT
GGAAGGTGGA ATGTGGTGGA TCCGTTGGCG GAGAAATATC ATAGCTATTC TATATACTCT
TATGTAGTCA ATAACCCGAT TGCTTTGATT GATCCAAACG GTATGGAAAT ACAAGAGATA
GCGGGCGGGG TTAGATTCAC GAAAGAAGAC GCACAAAGTG CTTATCGTGT ATTGACTAGT
AAGGCTAAAA ATGTTTATAT GGCAATTGTT GGGGAATCAA GTGTTAGAAG CCGTATTAAT
GAGTATCAAA AGAAGAATGG GAACGGACAA TGGGCTGGGT TTGCAGCCAA AAATTTTTCT
CAGGCTAATT TAGCTATGAG TGTTTTTGGT GATAAGAGCA TAAATAATTT CGTTTTAGAA
ACGCATGGTG GAAATGATGG TGCCGAATCT TTCATGAGGA TTAACGAGGA TGGAAGCAGC
AATCCAGAAA GTTATATCTA CAATAATGAA GTAAGTGATT TTAATAAAGG CATTCAGAAT
CCAGAGGTTT CTCAACTAAG TGCAATGGCC AGTAAGGTAA AAGACGGAGG AAATTTTATA
TTAGCAGCTT GTTATGTAGG TATTGGTGAA CCTGGGAATA AATTTGGACA AAATTTAAGT
AAGCTAACTG GGGATAGGTT AAATATTTTT CTACCTCAAA GTTTTGTACA TACAGGAAGG
ATAAGTAATC CCAGCGGGAC AACAATCCAA TTTGATGGAA GTTTAAAGGT TGATAATGGT
AAAGGGTGGT TAGGGGTGAC TCCTAATGGG AGTATGCAAA ATATTAACAA AATATTGCTT
TCACGAACTA CGTACCCACC GGTAAGGATA ATAAAATAG
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| Protein sequence | MLRIMKLYQN LTPQRAWKYI AVCLVAGFTS SNAQHLTLNT YSNQTEIKAT GSITLTDGFY
IPAGKNVRIF TGASFQQCVD LVSTPSADQN YISTKVFKKE GVNEGNINAT LSTCEVNQTV
QYFDGLGRPL QTVTVQGSPG FKDVVQPVDY DAFGREQFKY LPYSTVTGAN GSFKPSAITS
QAGFYNSPPA GVATITNTAF SESRFEASPL NRVLERGSPG ASWQLSAGHT QKMEYGSNNS
TDYAVRLYQA VPSATPGEEH KRILSGTGYY TANELYLSIS KDENWASTDG KAGTTEEYKD
KEDRVVLKRV FNYKNDVTET LSTYYVYDDL GNLSFVLPPG ANPDALALPS QTLQDQFCYQ
YRYDGRKRLI EKKLPGKDWE YMVYNKLDQL VLSQDSLQRV ANQWLFTKYD ALGRVAITGV
YGDGASRSSL AGTLNSQSVL WENRLGSGTD YDNGSFPQNN IAWYHTINYY DDYNFPGNSF
PQPDGVTQMS ASRVKGLQTG SFVYQVNSST RYLSVNYYDK DGRVLKTAAE NHLGGTDLTE
NTWNFAGELT GSTRTHSSGS GPATTIATRH EYDHMGRKKA TMESINGQPE VVLSKLDYNE
LGQLSKKWLH STDGNTFLQH TDYAYNERGW LKRSISGEFS IRLGYDTLGT PQYNGNITSQ
EWGTGYTFPS IYNYGYDKLN RLLSGVSTGA ISMSEVLSYD VMGNISTLNR DGAGAGSYIY
EGNRLKSISG GGLAAGSYAY DGNGNAVTDG RTGVNLTYNH LNLPITVNGS GLNIAYTYDA
MGRKLKKVSN MEAPSDYVDG VQYTGGAIEF IMTEEGKARS NGGTYSYEYN LTDHLGNVRY
TFYQHPSLGT LQPLQADDYY AFGKQRVASA GVNKYLYNGK ELQSELGQLD YGARFYDPVI
GRWNVVDPLA EKYHSYSIYS YVVNNPIALI DPNGMEIQEI AGGVRFTKED AQSAYRVLTS
KAKNVYMAIV GESSVRSRIN EYQKKNGNGQ WAGFAAKNFS QANLAMSVFG DKSINNFVLE
THGGNDGAES FMRINEDGSS NPESYIYNNE VSDFNKGIQN PEVSQLSAMA SKVKDGGNFI
LAACYVGIGE PGNKFGQNLS KLTGDRLNIF LPQSFVHTGR ISNPSGTTIQ FDGSLKVDNG
KGWLGVTPNG SMQNINKILL SRTTYPPVRI IK
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