Gene Phep_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1075 
Symbol 
ID8252169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1265590 
End bp1266939 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content37% 
IMG OID644934726 
Producthypothetical protein 
Protein accessionYP_003091355 
Protein GI255530983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.338783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0182355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TGAAAAAAAT GAGATTTATG CTTATTGTTT TATGCATACT CTGTTTTTCC 
TGTAAAAAAT ACCTGGATGT AAAACCTGAT TCCTCACTAA CGGTACCTAG TACTGTTGTA
GACCTCCAAA TGCTGATGGA AAATTATTCA ACGCTTAATT CTCAATATCC TATTGCTGGA
GAATTAATGG CTGATGATTA TTATACCGAA TCCTGGAATA ATTTACCTGA TAATTATAGA
GATGCTTATA TCTGGGGAGG AAGTGAATTT GATCAGGACG CTTCTTGGTT GTTCTCTTAT
CGACATATAC TAACATTTAA CAACGTGCTA GACAACATCG ATAAGGTTTC TTTTAAAAAG
AATGAAGCTG AATTGGTGAA TTATGTAAAA GGCAGCGCTT TATTTTTTAG AGCCTTTTAT
TTTTATGGAT TGACACAATT GTTTACGCGA CAATATGATC CCAATACAGC GAAAAATGAT
CTTGGGATTG TAATTCGAAA TACTTCTAAC TTCAATATAC GTTCTGTGAG GTCTACAAAT
GAAGAAACTT ATGAAAAAAT CATTTCAAAT CTTAAAGAAA GTATGGATTT ACTTCCAGAA
AGCCAGAGCA GTCCAAATCG ACCAACCAAA GCAGCTGCCA GTGGGTTACT ATCTAGGGTC
TATTTAAGTA TGAAGGAGTA TGCAAATGCA GGAAATTACG CAGACAAGGC TTTGGCTGCT
AAAGCAGAAC TAATGAACTT TAATGAATTG AATGTAATCA GTAATGCGCC GATTGGTAGG
TTTAATAAGG AGGTGATTTT TCCAATGACC TCAGGGTCTT TGATGCCTGC AGTTGCGTTA
GTCGATAGTA CGTTGGTGAA ATCATATCAT GAAAATGACT TGAGAAAAAG CTGTTTCTAT
CGACCTTTTG CAAATGGTTA TGCATTTAAA GGTGATTATG ATGGAACAGG CTTTGGTGTT
CGCCCGTTTA TATTTGCAGG TATTGCTACT GATGAAATGT ATCTAATTAA AGCGGAATGT
CAGGCAAGGG CTGGAAATGT AAACAGCGCT ATGCAAACTT TAAATAATCT TTTGATCACA
AGATGGAAAA CAGGGACGTT TATACCCCTT ACAGCCCAGA ATGCGAACGA GGCTTTAATT
CATATTCTAA CTGAAAGAAG GAAGGAATTG GTCTTCAGGA CAGTAAGATG GGGGGATTTG
CGGCGATTGC AAAATGATCC TTTGTTTTCT GTAACACCTA AACGTATAGT GAATGGCCAA
GAATATACCT TGCGACCTAA TAGCCCACGC TATGTATTGA AAATTCCACT CAAAGTAATT
CAGGAATCGG GAATTCCACA AAACCCATAA
 
Protein sequence
MKKMKKMRFM LIVLCILCFS CKKYLDVKPD SSLTVPSTVV DLQMLMENYS TLNSQYPIAG 
ELMADDYYTE SWNNLPDNYR DAYIWGGSEF DQDASWLFSY RHILTFNNVL DNIDKVSFKK
NEAELVNYVK GSALFFRAFY FYGLTQLFTR QYDPNTAKND LGIVIRNTSN FNIRSVRSTN
EETYEKIISN LKESMDLLPE SQSSPNRPTK AAASGLLSRV YLSMKEYANA GNYADKALAA
KAELMNFNEL NVISNAPIGR FNKEVIFPMT SGSLMPAVAL VDSTLVKSYH ENDLRKSCFY
RPFANGYAFK GDYDGTGFGV RPFIFAGIAT DEMYLIKAEC QARAGNVNSA MQTLNNLLIT
RWKTGTFIPL TAQNANEALI HILTERRKEL VFRTVRWGDL RRLQNDPLFS VTPKRIVNGQ
EYTLRPNSPR YVLKIPLKVI QESGIPQNP