| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1015 |
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| Symbol | |
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| ID | 8252109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1186264 |
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| End bp | 1189245 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644934669 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003091298 |
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| Protein GI | 255530926 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.045736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTG GATTATTACC TAAAATTCTA CTTATTGTCA AATATGGCTA TGTTTTGCTG
CTTATTTATG GCAGTTTGGC TATAATTGGA CACACCGAAG CTTTCTGTCA GAAGCATGAA
GGCATTACCA TCAATGGGAA AGTTTCCGAT GAAAAGGGTG AGACTTTACC CGGAGTAACG
GTAAAAGTAA AAGGAACAGC CGTTGGCACA ACAACAGATG CGGATGGAAA TTATACCGTT
AAGGCCCCAA AAGGGGCCAT GCTTACTTTC AAAAGCATTG GCTACCTACT GAAAGAGATT
GAAGTGAAAG ACCAGGTCGG GATCAATGTG GTTTTACAAA CTGATACTAA AACATTAGAG
GAACTCATCG TAGTTGGTTA CGGAACCCAG AAGAAAAGTG ATGTAACAGG TGCTGTAGCA
TCCATCTCTA AAGAAAGATT AGACAACATG GTAAGAACAG ATGTGGTACA GCTGATACAG
GGGGCAGCAG CCGGACTAAA TGTGTCTACT ACTGCAGCCG GGGCAGATCC TGAAAGTGGT
GCTGTGCTGT TGATCCGTGG CCGTAAATCT ATCAGTGCCA GTAACGATCC ATTGATCATT
CTTGACGGGA TCCCTTATAA TGGCATCTTA TCTGATATCA ATTCCAATGA TATTGAAAGC
CTGGATATTT TAAAAGATGC TTCTGCAGTT GCAATTTATG GTTCCAGGGC TTCAAATGGT
GTAATTCTGA TCCAAACGAA ACAAGGTACC AAAGGAAAGG CAGCCATTAA ATATGATTTT
TTGTACGGGT TACAGAATGT GGCCAATTTC CCACACCTGA TGAACGGTCA GGAGTATTAC
GATTTTAAAA AGGGAGTTAC CAATCCTGAT GATGATACCG AAGCTGCAAT TACCCCATCA
GAACTGGAAG TATACAATTC AGGTTCCTAC AATTCATTTA CCTGGAAAGA CCTGATCCTG
AGAAGGGGGA ACAGTCAGCA GCATAATCTA TCTGTATCTG GCGGTGCGGA AAAAACGACT
TACAATGTAA GTATGTCTTA CCTGGGTACA AAGGGTATTG TCATTAATGA CCAGTACAAA
CGCATCAATA CCAGGATAAA TGTTACTTCA AATATCAAAA GCTGGTTAAC ACTGGGCAGC
AGCAGTATGG CTGGGTATAT CAACAACAGC GGAGCCAAGC CCTCGTTTAT CGACCTGTTT
AATAAATCGC CTCTGGCGGT CCCTTTCAAC CCTGACGGTT CTGTAAACAT TACACCGATT
GCCGATGACC CAAGGAAGAT CAATCCGATT GAAAACCTTT TGTATGACGA TTTAAAAAGG
AAGTATTCCG TTTCCAGCAA TAACTACTTA AATGTTAACC TTCCTTTTGT AAAGGGACTT
TCTTACCGGC TGAATACAGG TGTGCAGTAT GAATCAGCTG AGAAAAACTG GTACCAGGGC
ACCAATACAG GTAAAAGCGG AGCCCTGAAA GGGGAGAGTG AAACCAATTT GGGGGTTAAA
TATTCTTATA CCATTGAAAG TATCTTTTCC TACAAAAGAG ATATCGGAAA ACACAATATT
TTCCTTACCG GCCTGTTAAG TGTTGAAGAA AAGGAAAATA AGAACAGCAT TTTAAACGGA
CAGGGTTTTG CCAACGACTT TTTATCTTAT TACGGCATTA CACAGGCCAG CAAAATTGTT
CCTTCCTATA ACTATTTTAA AACTAACCTC TTGTCGCAGA TGTTCAGGGC AAATTATGCT
TACGACAACA GGTACCTGTT CACGTTTACC GTGCGCAGGG ATGGCTTCTC GGGTTTTGGT
GCAAACAGAA AATACGGAGT TTTCCCTTCA GTGGCCCTGG GCTGGAATAT TGCCAATGAA
AAATTCCTCA GTGGCGTGAA AGAAACGCTT AGTACATTGA AACTGCGTGC ATCTTACGGC
CTTAGCGGAA ACCAGGCCAT TAGTCCTTAT CAAACCCTTT CGCAGCTTAC TGAAGGTGAT
TATATTGACG GAACAGTACC TGCACCCGGT TACATTCCTT CCACGCTGGG AACTGCCGGC
CTGGGCTGGG AATCTACACG GGCATTTAAT ATTGGTTTAG ATTTTGGCCT GTTTAATTCC
AGAATTACCG GTGATGTTAA TGTGTATAAA AATAAAACGA ATGATTTGCT CCTTAAACGT
GCTATTTCTG CAGTACACGG GGTAAACAGT GTATTTCAGA ATATTGGTAA AACCATCAAT
GAAGGGATAG AGGTCAGCAT TAACAGCAGG AACATTACCA AATCTAAATT CACCTGGGAC
TCAAACATTA ACTTCTCATT CATCAATACA GAAATATTGG ATCTATACGG GGACGGGAAA
AATGACATTG CCAATAACTG GTTTTTAGGA GAGCAGATCA AGGTAAATTA CGATTACAGA
TTTATTGGGG TCTGGCAGGA AGAAGATACG GAGCTGGCAG CTAAATATGG TGCAAAACCC
GGATATGCAA GGTATGAGGA TCTAAATAAT AATGGAGTTT ATGATCCTGA CGACCGTCAG
CTCATCGGTT CGCCAGAGCC TAACTTTACC TGGGGCCTTA CCAATAATTT CAAGTATAAA
AACTTCGGTT TATCGGTATT TATGTACGGT AAGATGGGCA CACTGAAGGC CAACCCCTAT
AAAGACAGAA ATTATTTAAT TGCCAGGACC TACTGGACAC CGGAGAACAG AAATAATGAG
TTCTGGGCCA ATTCCAGTCA GGCTAACCGT TATCTGGGAA AAGGGATAAC ACCTAGTGTC
TACGACAATG CAGATTTTAT CAGAATTAAA GATATCACGC TAAGTTATTC CTTTGCACCA
AAATTACTTT CAACAGCAGG CCTGAACAGG CTTAATGTAT TTTTTAGTGG GAAAAACCTC
TTCACCATCA CAAAATGGGG CGCGCTCGAT CCGGAGCTGG ATGCGCAACG GGCTATCCCT
TTACAGCGCG AATATATCAT GGGTTTAAAT CTTAGTTTCT AA
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| Protein sequence | MKFGLLPKIL LIVKYGYVLL LIYGSLAIIG HTEAFCQKHE GITINGKVSD EKGETLPGVT
VKVKGTAVGT TTDADGNYTV KAPKGAMLTF KSIGYLLKEI EVKDQVGINV VLQTDTKTLE
ELIVVGYGTQ KKSDVTGAVA SISKERLDNM VRTDVVQLIQ GAAAGLNVST TAAGADPESG
AVLLIRGRKS ISASNDPLII LDGIPYNGIL SDINSNDIES LDILKDASAV AIYGSRASNG
VILIQTKQGT KGKAAIKYDF LYGLQNVANF PHLMNGQEYY DFKKGVTNPD DDTEAAITPS
ELEVYNSGSY NSFTWKDLIL RRGNSQQHNL SVSGGAEKTT YNVSMSYLGT KGIVINDQYK
RINTRINVTS NIKSWLTLGS SSMAGYINNS GAKPSFIDLF NKSPLAVPFN PDGSVNITPI
ADDPRKINPI ENLLYDDLKR KYSVSSNNYL NVNLPFVKGL SYRLNTGVQY ESAEKNWYQG
TNTGKSGALK GESETNLGVK YSYTIESIFS YKRDIGKHNI FLTGLLSVEE KENKNSILNG
QGFANDFLSY YGITQASKIV PSYNYFKTNL LSQMFRANYA YDNRYLFTFT VRRDGFSGFG
ANRKYGVFPS VALGWNIANE KFLSGVKETL STLKLRASYG LSGNQAISPY QTLSQLTEGD
YIDGTVPAPG YIPSTLGTAG LGWESTRAFN IGLDFGLFNS RITGDVNVYK NKTNDLLLKR
AISAVHGVNS VFQNIGKTIN EGIEVSINSR NITKSKFTWD SNINFSFINT EILDLYGDGK
NDIANNWFLG EQIKVNYDYR FIGVWQEEDT ELAAKYGAKP GYARYEDLNN NGVYDPDDRQ
LIGSPEPNFT WGLTNNFKYK NFGLSVFMYG KMGTLKANPY KDRNYLIART YWTPENRNNE
FWANSSQANR YLGKGITPSV YDNADFIRIK DITLSYSFAP KLLSTAGLNR LNVFFSGKNL
FTITKWGALD PELDAQRAIP LQREYIMGLN LSF
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