Gene Phep_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1009 
Symbol 
ID8252103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1181396 
End bp1181869 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content43% 
IMG OID644934663 
Productprotein of unknown function DUF458 
Protein accessionYP_003091292 
Protein GI255530920 
COG category[S] Function unknown 
COG ID[COG1978] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.889316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGA AGAAATTTAG TGGCGAGATC ATTCACTCGT CCATCTTGGA AGAAGTAGAA 
AACGCCATCA TCAGAGAAAG TGACAACGGT TACCGGCTTA AAGTATGCAT CGGTACAGAT
TCGCAGGTTA AAGGCCCTCT TACCGATTTC GCTACAGTAA TTGTCTTGCT AAGAGAGCAT
CATGGGGGCT TCATGTATAT CCATCAGGAA AAAACCGCTC AAAAAATGAG CATTAAAGAA
AGAATGCTGG TTGAAGTACA GAAATCAATT GAAACTGCTT ATTCGATCTG CGACCTCCTG
GACCTGTACA ATGTAGACCT TGAGGTGCAT GCCGATATCA ACACCAATCC GGTGTTTAAA
TCAAACAAAG CATTGAACGA GGCCATGGGT TATATTTTAA GCATGGGCTT CATCTTCAAG
GCAAAACCTG AAGCTTTCGC CAGTTCAACC TGTGCTGATA AAATGGTACA CTGA
 
Protein sequence
MTWKKFSGEI IHSSILEEVE NAIIRESDNG YRLKVCIGTD SQVKGPLTDF ATVIVLLREH 
HGGFMYIHQE KTAQKMSIKE RMLVEVQKSI ETAYSICDLL DLYNVDLEVH ADINTNPVFK
SNKALNEAMG YILSMGFIFK AKPEAFASST CADKMVH