| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1002 |
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| Symbol | |
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| ID | 8252096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1174226 |
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| End bp | 1175725 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934656 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003091285 |
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| Protein GI | 255530913 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAG TTTTAAGCCA TAAAGGCCCT GATGAACCAA CCAAACCAAA ACACAAAATG
AAAGAAGAAA TTCAAGACGG ATCTTTTAAA AGAGAGCTTG GCCTGCTGGA TGGTACAATG
CTTGTTGTTG GATCGATGAT CGGTTCAGGG ATATTTATAG TAAGTGCTGA TATTACCAGA
CAGGTTGGTT CGGCCGGATG GCTGATATTG ATCTGGGTGC TTACCGCCCT GATCACCATT
ATCGCCGCAG TAAGTTATGG CGAGCTGAGT GCAATGTTCC CTAAAGCGGG CGGACAATAT
GTTTACCTGA AAGAAGCGTA CAATAAACTC ATTGCATTTT TGTATGGATG GAGTCTGTTT
GCCGTAATAC AAACTGGTAC TATAGCTGCG GTAGGGGTGG CTTTCTCAAA GTTTGCTGCT
TATCTGTTTG AACCTTTTAG TGAAAATAAC ATCCTGTGGC AAATCCAGAC CGGGATCGGC
GATAAAGGAT TGCCCCAATA TTACAGTATC AGTGCAGCAC AGCTGGTCTC AATTGTAACT
ATTGTATTGC TTACTTATGT GAACAGCCGT GGGGTTAAGG ACAGTAAGAT CCTGCAAACG
GTACTAACGA TCATTAAAAT TTTATCGCTT TTCGGACTTA TCGTATTTGG TTTTACCCTT
GCTGCTAAGG CCGAGGTATG GAATGCCAAC TGGGCCAATG CTTTTGAGAC CCGCTCTTTT
AGTTTGGAAA CTATGACCTG GACACCCATT AGCGGTAGTT TATTGCTTTC GGGTATTGCG
GCAGCCATGG TAGGCTCTAT TTTTTCGGCC GATGCCTGGG CCGGTGTTAC TTTTATCGCC
GGCGAAATTA AAAATCCGCA ACGTAATGTG GGTTTGAGTT TATTTTTGGG TACGCTTATC
GTAAGCATCA TTTACGTACT GGCCAACCTG ATGTATGTGG CCGTATTGCC CCTGGATGTG
ATTACCACCG CCAAATCAGA TCGTGTAGCC GTAGTGGCCG CACAATATAT TTTCGGACAG
GCGGGTACCA TTATCATCGC TGTAATGATC ATGATCTCTA CTTTTGCCTG TAACAATGGA
TTGATTATGG CGGGTGCCAG GGTATATTAT ACGATGGCCA CCGACGGATT GTTCTTTAAA
AAAGCAGCCA AATTGAACCG CTTTGATGTA CCGGGCTGGG CTTTATGGGT ACAGGGGCTA
TGGGCTTCGG CTTTATGTCT GACAGGAAGA TACGGTGCCC TGCTTGATTT TGTGGTGATC
ATTGTACTGA TCTTCTATAT CCTTACCATT TACGGAATTT TTATTCTGAG AAGAAAGATG
CCAGATGCGG AACGCCCATA CCGGGCTTTT GGTTATCCGG TACTGCCTTT TCTGTACATA
GTAGTGGCCT CAGCTTTGTG TATTGCCCTG CTCATCTATA AAACGGATAC CTGTGGCTGG
GGTGTGCTGA TTATGCTGAT CGGAATTCCT GTTTATTACA TGACCAGACA AAAGGAATAG
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| Protein sequence | MIRVLSHKGP DEPTKPKHKM KEEIQDGSFK RELGLLDGTM LVVGSMIGSG IFIVSADITR
QVGSAGWLIL IWVLTALITI IAAVSYGELS AMFPKAGGQY VYLKEAYNKL IAFLYGWSLF
AVIQTGTIAA VGVAFSKFAA YLFEPFSENN ILWQIQTGIG DKGLPQYYSI SAAQLVSIVT
IVLLTYVNSR GVKDSKILQT VLTIIKILSL FGLIVFGFTL AAKAEVWNAN WANAFETRSF
SLETMTWTPI SGSLLLSGIA AAMVGSIFSA DAWAGVTFIA GEIKNPQRNV GLSLFLGTLI
VSIIYVLANL MYVAVLPLDV ITTAKSDRVA VVAAQYIFGQ AGTIIIAVMI MISTFACNNG
LIMAGARVYY TMATDGLFFK KAAKLNRFDV PGWALWVQGL WASALCLTGR YGALLDFVVI
IVLIFYILTI YGIFILRRKM PDAERPYRAF GYPVLPFLYI VVASALCIAL LIYKTDTCGW
GVLIMLIGIP VYYMTRQKE
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