Gene Phep_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0837 
Symbol 
ID8251926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp989386 
End bp990558 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content44% 
IMG OID644934487 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003091121 
Protein GI255530749 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAAA TGATGGATGG TTCTGTAGGA TACAACTTTA GTATCTCAGA AAATCAGGAG 
ATGATCAGGG GCATGGTAAA AGATTTTGCC GAAAAAAATA TCAGACCAAA ACTGATGGAA
TGGGACGAAG CACAATATTT TCCTGTTGAA GTTTTTAAAA AGCTTGGTGA ACTTGGACTG
ATGGGTGTAT TGGTTCCGGA AAGCTACGGC GGTTCGGGGT TCGGCTACCA GGAATATGTA
GATGTTATTG TAGAGGTAGC AAAAGTTTGT GGTTCCATAG GTTTATCTGT AGCCGCACAT
AATTCTTTGT GCACAGGTCA TATCCTGGCT TTTGCCAATG AGCAGCAAAA ACAAAAATGG
TTGCCTAAGC TGGCAACTGC AGAATGGATA GGGGCCTGGG GATTAACAGA AGCAAATACC
GGATCGGATG CTTTAAGGAT GATGACTACT GCCGTATCTG ATGGTGATGA ATATGTAATT
AATGGCGCTA AAAACTGGAT TACGCATGGT AAAACAGGTG ATGTGGCTGT GGTAATGGTC
CGTACCGGTG AAAAAGGTGA TTCAAAAGGA ATTTCTGCTA TTGTTGTAGA ACGTGGTACA
CCTGGTTTTT CGGCAGGTAA AAAAGAGAAT AAACTTGGCA TGAGAGCCTC AGAAACGACG
GAAATGATAT TTGACAATTG CAGGGTTCCG GCAGCAAATC TTTTGGGGAA AGTTGGTGAA
GGCTTTAAAC AGGCGATGAA AGTATTGGAT GGTGGCAGGA TTTCGATAGC TGCATTGTCT
TTAGGTATTG CCAAAGGTGC CTATGAGGCT GCAGTTGCAT ACGCAAAAGA ACGTCATCAG
TTTGGACAGC CTATAGCCAG TTTTCAGGGG ATTAGCTTTA AGCTGGCAGA TATGGCCACT
GAGATTGAGG CTGCGGAGCT GTTGATCAGA CAGGCGGCCG ATTTAAAGAA CAGAGGACTG
CAGATGACGA AGGAATCGGC AATGGCTAAA TATTTCGCCT CGGAAGTTGC CGTAAGATGC
GCTACTGAAG CAGTTCAGAT TTTTGGGGGC TATGGGTATA CCAAAGATTT TCCTGTTGAG
AAGTTTTATC GCGACAGCAA ATTGTGCACA ATAGGAGAGG GAACCTCAGA GATTCAGAAA
ATTGTAATTG CACGGGAAGT ACTGAAAGAC TAG
 
Protein sequence
MLEMMDGSVG YNFSISENQE MIRGMVKDFA EKNIRPKLME WDEAQYFPVE VFKKLGELGL 
MGVLVPESYG GSGFGYQEYV DVIVEVAKVC GSIGLSVAAH NSLCTGHILA FANEQQKQKW
LPKLATAEWI GAWGLTEANT GSDALRMMTT AVSDGDEYVI NGAKNWITHG KTGDVAVVMV
RTGEKGDSKG ISAIVVERGT PGFSAGKKEN KLGMRASETT EMIFDNCRVP AANLLGKVGE
GFKQAMKVLD GGRISIAALS LGIAKGAYEA AVAYAKERHQ FGQPIASFQG ISFKLADMAT
EIEAAELLIR QAADLKNRGL QMTKESAMAK YFASEVAVRC ATEAVQIFGG YGYTKDFPVE
KFYRDSKLCT IGEGTSEIQK IVIAREVLKD