Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0825 |
Symbol | pheT |
ID | 8251914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 973621 |
End bp | 976020 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934475 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_003091109 |
Protein GI | 255530737 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAT CATACAGTTG GCTTAAACAG TTCATTCAAA CAGATCAAAC ACCACAGGAA CTTTCATTAA TATTGACCAA TATAGGTTTG GAGGTGGAGA GCCTTGAGAC AGTACAAGCT GTTGCAGGTG GATTGGAAGG GCTGGTTATA GGTCATGTAC TGAGCTGTGT GCAGCATCCG AATGCCGACC GCCTGCGGGT AACTACAGTT GATGTTGGCG GACCGGAAAT TTTACAGATT GTTTGTGGAG CTCCTAATGT GGCCCAGGGC CAAAAGGTAG TAGTTGCAAC AGTGGGCACT ACAGTTTATC CGAATGAAGG GGAACCTTTT AAGATCAATA AATCAAAAAT AAGGGGAGAG GTCTCTGAAG GTATGATCTG TGCCGAGGAC GAGATCGGTT TGGGCATTTC TCATGATGGC ATTATGGTAT TGCCGGAGGA TGCACAGGTA GGTACCCCCG CTAAAGTATA TTTTAAGCTT GAAGATGATT TTCTTTATGA AATTGGCCTT ACCCCAAACA GGGCTGATGC CGCATCGCAT TTAGGTGTAG CCAGAGACCT GGCTGCTTAT TTCCGTACGG ACATCCGGAT GCCTGATATT TCCGGCTTTA AGGCAGATGA GGAAAGTTTG CTGATAGACG TTAAAGTTGA AGATACTGCT GCCGCCCCAA GGTACAGTAG CGTAACCATT AGTGGAGTTA CTGTTAAGGC ATCACCAGAC TGGTTGCAGA ATAAATTAAA AGTAATCGGT ATCCGGCCAA TCAATAACAT CGTAGACATT ACCAATTATG TGTTGCACGA CCTTGGTGTG CCACTTCACG CTTTTGATGC AGACCAGATC AAAGGAGCTA AAGTTATTGT GAAAAAATGT GCAGCAGGAA CACCTTTTGT AACACTTGAC GGTGTAGAAC GCAAATTATC TGCAGAAGAC CTGATGATCT GTAATGCGGA AGAGCCGATG TGTATTGCAG GTGTTTTTGG CGGAAAAAGC TCTGGTATAA GCGACACCAC AACCAACATA TTTTTAGAGA GCGCCTATTT TAATGCGGTA TCGGTTCGTA AAACCTCGAA AAGACATAGT TTAAAAACCG ATGCTTCTTT CAGGTTTGAG CGTGGTACCG ATCCGGATAT GACGGTTGTT GCTTTAAAGC GTGCTGCTTT GCTCATCGCT GAACTTGGGA ATGGGAAAAT CTCCTCCCCG GTTTCTGATA TTTATCCTGA ACCGGTAAAA CCTTATGAGG TAGATGTAAA TTACAGCAAT ATCAACAGGT TAATCGGTGC CGAAATTCCT GCTGAAGAAA TTAAAGCCAT TATCATTGCA CTAGGAATTC ATGTTGCAGC TGAAACTGCA GATGGCCTTA GCCTGAAGGT TCCTGCCTTT AAGGTAGATG TGACAAGGGA ATGTGACATT ACCGAGGAGG TGCTCAGGAT TTACGGTTAC AACAATATCG AAATCCCAAG CAAAATAAAT GCTTCCTTAT CCTACAGCTC GAAACCTGAT AAAGAGCAGA CACAGCATGT GATTGCAGAT ATGCTTACTG CAAATGGCTT TTTAGAGATC TGGTGCAATT CATTAACTAA AGGGGCCTAT TCAAAAGCTC CTGATGAAGC CGTACAGATC TTAAACCCTT TAAGTTCAGA CCTGAACGTA ATGCGTCAGG AACTGTTGAT GCCTGCATTG GAAAGTGTTG CCTATAACCA AAACAGGAAA ACAGCCGACA TTAAGTTTTA TGAATTTGGT AAAACTTATC ATTTAATAGC TGGTAAATAC GTAGAGCGTC CGCGTTTATT GATATTGCTT TCTGGTAATA ACCAGGCCGA ACAATGGAAC CAAAAACCGG CCCCGGTTAG TTTTTATCAT TTAAAGGCTG CTGTTGATGC TGTTATTGGT CGCTTGGGTA TTGCTACTTA TCAGCTGGAG GAAGTAAAAG ATGAGCGTTT TGCTTTCGGG CTTAGGTATT TCAGAGGGGA TAAAACGCTT GTAAGCTTTG GTGCGGCAAC AGCGGCAGAT AAAAAGAAAG CCGATGTAGA TAAGGATGTT TATTATGCAG ATTTTGACTG GGCTTTGCTT TTAGACCTGG TAAGGAAAAA TAAAATTGTA AATAAAGAAG TGCCGAAATA CCCGGCAGTA CGCAGAGATC TGTCTATGCT GGTGGATACA GATGTAACGT TTGACACGTT AAAGTCTATC GCATTTAAGA CCGAGAAGAA GCTGATCCGG AATGTACAGG TATTTGATGT ATACATCGGA GATAAACTGC CGGCGGGTAA AAAGTCGTAC GCCCTTAACT TTACACTTCA GGATGAAGAG CAGACCTTAA CCGATAAACA GATTGATGCA GTTATGCAAA AAATTATGCA TAACTTAGCA CAAACAGTTA ATGCAGAAAT TAGAAAATAA
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Protein sequence | MKISYSWLKQ FIQTDQTPQE LSLILTNIGL EVESLETVQA VAGGLEGLVI GHVLSCVQHP NADRLRVTTV DVGGPEILQI VCGAPNVAQG QKVVVATVGT TVYPNEGEPF KINKSKIRGE VSEGMICAED EIGLGISHDG IMVLPEDAQV GTPAKVYFKL EDDFLYEIGL TPNRADAASH LGVARDLAAY FRTDIRMPDI SGFKADEESL LIDVKVEDTA AAPRYSSVTI SGVTVKASPD WLQNKLKVIG IRPINNIVDI TNYVLHDLGV PLHAFDADQI KGAKVIVKKC AAGTPFVTLD GVERKLSAED LMICNAEEPM CIAGVFGGKS SGISDTTTNI FLESAYFNAV SVRKTSKRHS LKTDASFRFE RGTDPDMTVV ALKRAALLIA ELGNGKISSP VSDIYPEPVK PYEVDVNYSN INRLIGAEIP AEEIKAIIIA LGIHVAAETA DGLSLKVPAF KVDVTRECDI TEEVLRIYGY NNIEIPSKIN ASLSYSSKPD KEQTQHVIAD MLTANGFLEI WCNSLTKGAY SKAPDEAVQI LNPLSSDLNV MRQELLMPAL ESVAYNQNRK TADIKFYEFG KTYHLIAGKY VERPRLLILL SGNNQAEQWN QKPAPVSFYH LKAAVDAVIG RLGIATYQLE EVKDERFAFG LRYFRGDKTL VSFGAATAAD KKKADVDKDV YYADFDWALL LDLVRKNKIV NKEVPKYPAV RRDLSMLVDT DVTFDTLKSI AFKTEKKLIR NVQVFDVYIG DKLPAGKKSY ALNFTLQDEE QTLTDKQIDA VMQKIMHNLA QTVNAEIRK
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