Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0817 |
Symbol | |
ID | 8251906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 967835 |
End bp | 969016 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644934467 |
Product | PepSY-associated TM helix domain protein |
Protein accession | YP_003091101 |
Protein GI | 255530729 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCTA AAACAATAAA GAAGTGGTTT GATGTTCATA AATGGACCAG TCTGATATGT ACGGTCTTTT TGCTCATGCT GTGCCTGACG GGTTTGCCGC TTATATTTTA TGAGGAAATT GACCATTTGC TGGGCAGGGA ACTGGAATTG CCTGCCGTTG CGCCCGGAAC ACCGGCAATT TCGAAAGATG TTGTGCTGGA AGAGGCTGTA AAACAGGTGC CCGTAAAGGC GGTGAAGTAT GTGTCATGGG ACCTGAAGGA GCACCCTGGT CAGATGTTTG TTGTGGTGGC AGACTCAAGT GAGGCACCTG TTCAGGCCGA CCATTATTTG ACAATGAATG AGTATACGGC AAAGGTAATG GCCACGCCGC CTAATGAAAT GGACTTCATG CTGGTGATGT ATTACCTCCA TGTTGAAATG CTGGCAGGTA TACCCGGTAA ACTTTTTCTG GGTTTAATGG GCTTACTTTT TATTGTGGCC ATCGTTTCGG GTGTGGTGTT ATACGGTCCG ATCATGAGGC GTTTTGATTT TGGTATGATC CGTACGGAGA AATCATTAAG GTTGAGATGG CTGGACCTGC ATAACCTGCT TGGAATTGTA ACACTGGCCT GGGCATCGGT TGTAGGGCTT ACGGGAGTGA TCAATACACT GGTAGATCCG GCACTGGACA GATGGAAGGC AAGTCAGCTT GCTGAAATGG TTGCCGGATA CAAGGATAAA CCAAAGGTAA CAGGCACATT AAGTTCCCTG GATGCAGCTG TTAAAACAGC TAAGGCTGCA GCGCCCGGCA TGGATGTGTC TTTTGTAGCT TATCCGGGTA CGCTATATTC CAGTAAATAT CATTATGCGG TGTACATGAC AGGGACTACT CCCTTAACTT CAAGGATCAT TAAGCCCGCT TTAATAGATG CCAAAACAGG GGAGCTGACA GCTATTCGTG ATCTTCCCTG GTACCTGAAA ACAATCTTTA TCTCTCAGCC TTTTCATTTT GGCGATTATG GGGGAATGCC TATGAAGGTG CTTTGGGCTA TTTTTGATAT CGCTACCATT ATCGTATTGA TTTCAGGGAT TTATCTCTGG CTTGCCAGGC GCAAATCGAG GTCCGCACAG CTGAAAAGAC TGACGGGGGA ATCCGGATCG TTAACTTTAT CAACCGTTCA TGAAAATGCA GAAAAAAAAT AG
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Protein sequence | MKAKTIKKWF DVHKWTSLIC TVFLLMLCLT GLPLIFYEEI DHLLGRELEL PAVAPGTPAI SKDVVLEEAV KQVPVKAVKY VSWDLKEHPG QMFVVVADSS EAPVQADHYL TMNEYTAKVM ATPPNEMDFM LVMYYLHVEM LAGIPGKLFL GLMGLLFIVA IVSGVVLYGP IMRRFDFGMI RTEKSLRLRW LDLHNLLGIV TLAWASVVGL TGVINTLVDP ALDRWKASQL AEMVAGYKDK PKVTGTLSSL DAAVKTAKAA APGMDVSFVA YPGTLYSSKY HYAVYMTGTT PLTSRIIKPA LIDAKTGELT AIRDLPWYLK TIFISQPFHF GDYGGMPMKV LWAIFDIATI IVLISGIYLW LARRKSRSAQ LKRLTGESGS LTLSTVHENA EKK
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