Gene Phep_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0802 
Symbol 
ID8251891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp949947 
End bp950528 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content46% 
IMG OID644934452 
ProductThymidine kinase 
Protein accessionYP_003091086 
Protein GI255530714 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTCA GCGAACAAAA TTACAGGCGG GGTGAGTATT GCGGCAGCAT TGAAGTGATT 
TGTGGCTCTA TGTTTTCGGG TAAGACCGAA GAATTGTTAA GAAGGCTAAA ACGTGCGCAG
ATTGCTAAAC TGAATGTAGA GATCTTTAAA CCCAAAACAG ATACCCGCTA TGATGAAACC
GCTGTAGTTT CGCACGATCT GAATTCCATC CAGTCTACAC CGGTCGAAAA CTCTGCTGCA
ATTCTGCTGC TGGGTGCCAA TACACAGGTT GTTGGTATTG ATGAAGCACA GTTTTTTGAT
GATAACCTGC CTGAAGTTTG TAATAAACTT GCCCAGAAAG GGATCAGGGT AATCGTTGCT
GGTCTCGATA TGGACTTTCA GGGCAAACCT TTTGGCCCAG TACCCGCATT AATGGCTATT
GCCGAGCTGG TAACCAAGGT AAATGCAGTA TGTGTACGTT GTGGAAGTCC GGCTGTATAC
TCTTACCGTA CAGCTGCCAG TGAAAGTACG ATCCTGCTAG GCGAAAAGGA CAGTTATGAA
CCCAGGTGCA GGCATTGCTA TCATTTGGGC GACATGGCTT AG
 
Protein sequence
MLFSEQNYRR GEYCGSIEVI CGSMFSGKTE ELLRRLKRAQ IAKLNVEIFK PKTDTRYDET 
AVVSHDLNSI QSTPVENSAA ILLLGANTQV VGIDEAQFFD DNLPEVCNKL AQKGIRVIVA
GLDMDFQGKP FGPVPALMAI AELVTKVNAV CVRCGSPAVY SYRTAASEST ILLGEKDSYE
PRCRHCYHLG DMA