Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0757 |
Symbol | |
ID | 8251846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 881416 |
End bp | 882762 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644934407 |
Product | sugar transporter |
Protein accession | YP_003091041 |
Protein GI | 255530669 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0214435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTATG TATATAAGAT CACGATTGTT GCGGCAGTAG GTGGCTTATT GTTTGGTTAC GATACGGCAG TTGTGGCCGG AGCCATTGGT TTTATCCAGC AGCGGTTCGA CCTTTCGCCG GCTATGATGG GCTGGATCGC CTCCTGTGCC CTGGTAGGCT GCATTACAGG AGCAATGTTT GCGGGGTACC TGAGCGACCG CTTTGGCCGT AAAAAGATCC TCATCCTTTC CGCCATCCTT TTTGCGGTAT CATCTGTAGG TACTGCGATG CCGCATGAAC TCAGTTGGTT TGTGGTATTC AGAATTTTAG GCGGACTGGG TATCGGCATT GCATCTATGA TCTCGCCCAT GTACATCACA GAATGTGCAC CGGCAGCTAT CCGTGGCCGC CTGGTTTCCA TTAACCAGTT TGGCATTGTA ACGGGTATCC TGCTCATTTA TTTTGTAAAT GCGGGCATTG CCGGCTTGTA TGACGAAGCC TGGAACATCC ATACCGGCTG GCGCTGGATG TTTGGCTCGG GCATCATACC TTCAGTGGTT TTCTTTATCC TGCTTATGTT TGTACCTGAA AGTCCGAGGT GGCTGATACA GGCGGGGAAA GCTAAAGAAG CAGAAGAGAT CCTGACTAAA ATTAATGGGG CAGCAAAGGC TAAAACAGAA TTAGCTGAAA TTGAAGCGGC TATCCATACC GAAACGGGTA CCTTCGCCGA ACTCTTTAAA CCGGGATTAA GAACCGCACT GATCATCGGT ATTATCCTTT CTATCGTATC ACAGGTTACC GGCATCAACG CCATCATGTA TTATGCACCC GAAATTTTTA AATCTACCGG CGATGGATCT GGTTCAGCCT TATTGCAGAC TATACTGGTT GGGGTGGTCA ACCTGTTGTT TACCATAGTG GCTATTAAAT ATGTAGACCG CGCCGGTCGT AAAGGCCTGC TCATGGCCGG CTCAGCAGGC ATGGCCATTT GTCTGGCCAT TATCGGCATG GCATTTCATA TGGATGCCGT TAAAGGATAC CTGGTATTGG TAGCTATCCT GGCCTATATT GCCTGTTTTG CCTTGTCATT AGGGCCTTTG ACCTTTGTGG TTATAGCCGA GATCTTTCCA AACCGGGTGC GTGGCCGGGC CATGTCCATC TGTCTTTTCT TTCTCTGGGC CTCCGTTTAT TTCGTATCCC AGTTTTTCCC CATGTTGTTA AAATCTATCG GCAGCGCTTA TACTTTCTGG ATCTTTATGG GCACTTCTAT CGTCGCTTTT CTGTTTGTAT GGAAGCTTGT TCCGGAAACC AAAGGGAAAA GTCTGGAAGA AATTGAAAAA TCATGGCACA AAACCGGTAC TGTTTAA
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Protein sequence | MSYVYKITIV AAVGGLLFGY DTAVVAGAIG FIQQRFDLSP AMMGWIASCA LVGCITGAMF AGYLSDRFGR KKILILSAIL FAVSSVGTAM PHELSWFVVF RILGGLGIGI ASMISPMYIT ECAPAAIRGR LVSINQFGIV TGILLIYFVN AGIAGLYDEA WNIHTGWRWM FGSGIIPSVV FFILLMFVPE SPRWLIQAGK AKEAEEILTK INGAAKAKTE LAEIEAAIHT ETGTFAELFK PGLRTALIIG IILSIVSQVT GINAIMYYAP EIFKSTGDGS GSALLQTILV GVVNLLFTIV AIKYVDRAGR KGLLMAGSAG MAICLAIIGM AFHMDAVKGY LVLVAILAYI ACFALSLGPL TFVVIAEIFP NRVRGRAMSI CLFFLWASVY FVSQFFPMLL KSIGSAYTFW IFMGTSIVAF LFVWKLVPET KGKSLEEIEK SWHKTGTV
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