Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0745 |
Symbol | |
ID | 8251833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 866035 |
End bp | 866832 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644934394 |
Product | beta-lactamase domain protein |
Protein accession | YP_003091029 |
Protein GI | 255530657 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.294685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTGTA AACACCTCTT TATTGCCTCC TTAAATTCCG GAAGTAACGG TAACTGCTAC TATGTGGGTA ACGAAAGGGA AGCCATATTG GTGGATGTCG GTATTTCATG CCGGGAAACT GAAAAGAGAA TGTTCCGGCT GGGCTTATCT ATGCAAAAGG TAAAAGCCAT ATTCATTTCC CACGAACATA CCGACCACGT TAAAGGTCTT TGTACCCTGG CCGCGAAATA TAACTTGCCT GTTTACATCA GCCCTGGTAC CCTTTCCGGC TGCCGCTTCA ACCTTAGAGA AGAGCTCATC AACTATTTAA ACAACAACGA GACCATTCAG ATAGGCAGCC TTACGGTTAC AGGATTCCTT AAAATACACG ATGCCTCAGA GCCCTACAGC TTTGTGGTGG CCTGCGGGGA AACCAAAGTT GGTGTATTTA CAGATATCGG AGAAGCCTGC GACCAGCTCA TATTTCATTT CAGACAATGT CATGCAGCTT TCCTCGAAGC CAATTATGAC GATGCCCTGC TGGAAAAAAG TGCTTACCCT TATTTCCTTA AAAAGCGCAT CAGCGGGGGC AAGGGCCACT TATCCAATAA AAAAGCACTT GATCTTTTCA GCAGCCATAG GCCTGCTTTC ATGACGCACC TGCTGCTCGC CCACTTGTCT AAAGACAACA ACTGCCCCGA TCTGGCCCTG GAGCTGTTCC GGCAACAGGC CAATGGCACC GAAATCATCG TGGCCTCCAG GTATGAAGAA ACCCAGGTGT ATACTATTTT TGAGCCAGCA GCTGCGCATT CATTTTAA
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Protein sequence | MDCKHLFIAS LNSGSNGNCY YVGNEREAIL VDVGISCRET EKRMFRLGLS MQKVKAIFIS HEHTDHVKGL CTLAAKYNLP VYISPGTLSG CRFNLREELI NYLNNNETIQ IGSLTVTGFL KIHDASEPYS FVVACGETKV GVFTDIGEAC DQLIFHFRQC HAAFLEANYD DALLEKSAYP YFLKKRISGG KGHLSNKKAL DLFSSHRPAF MTHLLLAHLS KDNNCPDLAL ELFRQQANGT EIIVASRYEE TQVYTIFEPA AAHSF
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