| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0730 |
|---|
| Symbol | |
|---|
| ID | 8251818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 850262 |
|---|
| End bp | 850846 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644934379 |
|---|
| Product | HPP family protein |
|---|
| Protein accession | YP_003091014 |
|---|
| Protein GI | 255530642 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGAA GAATCATTAA AAAACAATAC CGCAAAGCCA GATACATATT ATATCGCGAA
ACTTTAATCG ATGCTAAAGA GCATGTGCTT ACTTTTCTCG GTTCTTTTGT TGGGATCGGC
CTGATTGGTT TACTGAACAG TCAATACCTG GTGGCCAGCG ATAATTTATT CCTGATCGGG
TCATTTGGAG CCTCCTCTGT ATTGGTATAT GGCCTGATCA ACAGTCCCCT TGCCCAGCCC
CGCAACCTTA TTGGAGGGCA TGTGATCTGT GCTATTATTG GTGTTACTGT TTTTAAGCTC
TTTTCGGCCG AACTCTGGTT TGCCTGCGCA CTGGCGGTTT CTTTATCTAT TGTAGCCATG
CAGATCACCA AAACCCTGCA CCCTCCGGGC GGGGCTACTG CGCTCATCGC AGTAACCGGT
GGAGAAAAGA TCAGGGCACT GGGTTATATG TATGTATTGT CGCCCGTATT GTCGGGTGTA
CTGATCCTGT TCCTGGTGGC ACTGATATTC AATAACCTGA GACACCGTAA ATACCCTTCA
AAACCAATTT TGAAAAGACG GAAAGCCCCC AGGTTTGCCC GATAG
|
|---|
| Protein sequence | MPGRIIKKQY RKARYILYRE TLIDAKEHVL TFLGSFVGIG LIGLLNSQYL VASDNLFLIG
SFGASSVLVY GLINSPLAQP RNLIGGHVIC AIIGVTVFKL FSAELWFACA LAVSLSIVAM
QITKTLHPPG GATALIAVTG GEKIRALGYM YVLSPVLSGV LILFLVALIF NNLRHRKYPS
KPILKRRKAP RFAR
|
|---|
| |