Gene Phep_0724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0724 
Symbol 
ID8251812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp837825 
End bp839000 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content44% 
IMG OID644934373 
ProductFecR protein 
Protein accessionYP_003091008 
Protein GI255530636 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAGG ATGTACAACA ACTACTCAGT AAATACAAAG CAGGAACCGC CACGGCACAG 
GAAATTGCCC TGGTTAATCG CTGGTATGCC ACTGAAGCAG CCCGCTTGAA CATGCCGGAG
GGCCCTCCAG AACCCTTGCT GGAAGAACAG CTGATCTGGG ACCGCATCAA AGCGGCTATC
CCGCTAAATT CCGAATTACC TGTAAAGGAG GCAAAGCCGA AAAAATTGAA TGATCTTAAA
TGGCTTGCCA TCGCTGCGTC CTTGTTGATA TTGCTTTCTG CAGGCTTCTA CCTCTACAAA
AATACCTATA ACCATGAGGC TGAAATGGCC AGGTTAAGAG CACACGATAT TAAACCTGGT
GGGAATAAAG CAACGCTTAC CCTGGCCGAT GGAACTCAGC TTGCTTTGGA TGATCAGGCC
GATGGAGAGA TTGCGAAACA AGCGGGTACC AGTATCAGTA AAACTACTAA TGGTCAACTT
ATTTATACGG TTAAAGACAA CCCTACCGGG GAAGTGACCA ACAATACCAT CAGTACACCG
AGGGGCGGGC AATACCAGGT CAACCTTCCT GATGGTACTA AGGTATGGCT AAATGCCCAG
TCGTCTTTAA CCTTTCCAAC TGCTTTTACC GGTAACCGGA GATTGGTCAA TCTTAAAGGA
GAGGGATACT TTGAAGTAGC TAAGTTAAAA AAAATGCCTT TTATAGTGGT AGCTAATAAG
CAGACCGTAT TTGTTTATGG TACACATTTT AATGTAAACA GTTATGTTGA TGAGGAACGT
ACAAAAACAA CGCTATTGGA AGGCAGTGTG GATGTATTAA GTACAGAGCG TGAACAAGCT
CCGAAAGCCA TATTTAAAAT CGCAACGCTC AAACCTGGCC AACAAGCAGA ATTCAGCAAC
GGACACCTCA AAGTTCAGCA GGCGGATGTT GAAGAGGCCA TTGCCTGGAA AAATGGTAAA
TTCAAATTCA GCAACGAAAA CATAGAAAGC CTGATGCGTA AAGTAGCACG CTGGTATGAT
GTAGATATTG AATACAAGGG CAAGATATCT AAAGAAGGTT TCGGCGGACA GGTTTCCCGC
TCCCGCAATG TTTCTGAAAT TTTAGAGGTT TTACAATTAA CCCGATTGGT CCACTTTGAA
ATAGAAGGAA GGAGGATTAT CGTTTCATCA GAATAA
 
Protein sequence
MEQDVQQLLS KYKAGTATAQ EIALVNRWYA TEAARLNMPE GPPEPLLEEQ LIWDRIKAAI 
PLNSELPVKE AKPKKLNDLK WLAIAASLLI LLSAGFYLYK NTYNHEAEMA RLRAHDIKPG
GNKATLTLAD GTQLALDDQA DGEIAKQAGT SISKTTNGQL IYTVKDNPTG EVTNNTISTP
RGGQYQVNLP DGTKVWLNAQ SSLTFPTAFT GNRRLVNLKG EGYFEVAKLK KMPFIVVANK
QTVFVYGTHF NVNSYVDEER TKTTLLEGSV DVLSTEREQA PKAIFKIATL KPGQQAEFSN
GHLKVQQADV EEAIAWKNGK FKFSNENIES LMRKVARWYD VDIEYKGKIS KEGFGGQVSR
SRNVSEILEV LQLTRLVHFE IEGRRIIVSS E