Gene Phep_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0712 
Symbol 
ID8251800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp823779 
End bp825026 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content45% 
IMG OID644934361 
Producthypothetical protein 
Protein accessionYP_003090996 
Protein GI255530624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0141103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT TTAAAACGAT ACTTACCCTA TTCATGCTGG TATCGGTGGT GATGTCTTCC 
TGTAAAGAAG AAACCCTTAA GCCGCTTTAC GGTGAAAAAG GTGCACCCAA ACCAGTTACA
AATGCTTCGG TTGAAAACAT TGCTGGGGGG GCTATAATTA GTTATACCCT TCCCGATGAT
GCAAATCTTT TATATGTAAA AGCAGAATAT GAGCGCCAGG GTAAAATGGT GGTCTCGAAA
TCATCTTTTT ACAAAAAATC AGTCCTTATT GAAGGCTTAG GTGATACCAA TCCGCGCGAG
GTTAAACTTT ATGCAGTTGG AACCGGTGAA GAAGCATCCG CACCAATTAA AGTAACCATT
AACCCCTTAG CCCCTCCAAT CTTTGGCGTG ATGCAGTCCC TGGCCATCAG AGAGTCCTTT
GGTGGAATGA ATGTGAAGTT CCTGAACCCG GCATCTACAG GCGAACGCCC CTACAATATT
GTAATTGGTG TAGTGGTATG GGACGACAAG CTGAGCGAAT GGAAAGATGT AGATGCCTAT
TATACAGGTT TGGCCTCAGG TGGTTTTTCA GTACGTGGCC TGGAAGCTAA ACCCCGTAAG
TTTGGTTTTT TCGTAAAAGA TACCTGGGAC AACCGAACAG ATACTTTGCA GAAAGAAATG
ACGCCAATAT ATGAAGAGCA GTTAAAAGCA GCTGTAGATG TCAGGAAAAA ATTTCCGATC
CCGCAGATAA GACCGCTTCC TGTTGACGGT TCCCTGCTGG CAGAACCTGG TAACCTGAGT
TCATGGCCGT TCACCAATTT ATTCGACAAT CAGATCGGTA ACAATGGTTT TCATTCCAAT
GAGAAAAATC CCTTACCAGC CTGGTTCCCT ATGGATTTGG GTAAAGTTAC ACGTTTAAGC
CGCTATAAGA TCTGGCAACG TATGCACGAT GACAACTCGA CTTATTTTTA TAGCCATGGA
AACCCCCACG AATGGGAAAT ATGGGGTACC AATACACCTG CCGATCAAAA CAGCTGGGTA
ATGCTCGATC ACCAGATCAT GGTAAAACCT TCAGGATTGC CAGTCGGACA GGTATCCAAT
GATGATGTGG AGATTGCCCG TGCCGGTCAT GAATATGAAT TCCCGCTCGA TGCGCCTGCG
GTAAGGTATA TCGCCTGGAA ACACATTGAT AACTGGGCAT CCATACAGGG TACACTAGGT
TTTCTGCATA TGTCCGAGTT AAGAATATGG GGACAGATTC AACAATAA
 
Protein sequence
MKQFKTILTL FMLVSVVMSS CKEETLKPLY GEKGAPKPVT NASVENIAGG AIISYTLPDD 
ANLLYVKAEY ERQGKMVVSK SSFYKKSVLI EGLGDTNPRE VKLYAVGTGE EASAPIKVTI
NPLAPPIFGV MQSLAIRESF GGMNVKFLNP ASTGERPYNI VIGVVVWDDK LSEWKDVDAY
YTGLASGGFS VRGLEAKPRK FGFFVKDTWD NRTDTLQKEM TPIYEEQLKA AVDVRKKFPI
PQIRPLPVDG SLLAEPGNLS SWPFTNLFDN QIGNNGFHSN EKNPLPAWFP MDLGKVTRLS
RYKIWQRMHD DNSTYFYSHG NPHEWEIWGT NTPADQNSWV MLDHQIMVKP SGLPVGQVSN
DDVEIARAGH EYEFPLDAPA VRYIAWKHID NWASIQGTLG FLHMSELRIW GQIQQ