Gene Phep_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0704 
Symbol 
ID8251792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp812144 
End bp812914 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content44% 
IMG OID644934353 
ProductABC transporter related 
Protein accessionYP_003090988 
Protein GI255530616 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.187193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAA CAAATGCCAT TATCAGTGTA AAGAACCTGG TAAAAAAATA CGACGATTTT 
ATTGCCGTTC AAGGCCTTAG CTTTGACGTA TATGAAAACG AGATTTTCGG GCTTTTAGGT
CCTAACGGAG CAGGAAAAAC GACAACCCTG GAAATCATTG AGACCCTCCG TGAAAAGACC
TCAGGAGAGA TCATTGTTGA TGGGTATTCG GTAGAAAAGG ATGCCGGCAA AATCAAAAGG
ATCATTGGCG TACAACTGCA GGCCGCAGGC TATTATCCAA ACCTGAACCT GGTTGAACTG
ATGGAACTCT TTTCAGGATT GTATAATGTT GATATCAAAC CGATGGAAAT GCTGGAAAAG
GTAAACCTGC AGGATAAGGC CAAAGCCAAA TACAAAGCTT TGTCGGGTGG ACAAAAACAA
CGTTTCTCTA TCGCTACCAC ACTAATCAAT TCGCCCAAAA TAATTTTCCT GGACGAACCT
ACAACTGGTT TGGACCCACA GGCCAGGCGC AATTTGTGGG ACCTCATTAT TGATATCCGG
AACAACGGGA CAACCGTAGT GATCACAACC CATTACATGG ACGAGGCTGA GCAACTGTGC
GACCGTGTTG CCTTTGTGGA ACGCGGGGAG ATCATTGCCC TGGACACCCC TGACAATCTG
ATAGACAAAC TGGTCAACAG TGGTTTTGAA AGAAAAAAAG AAGTTAAAAA AGCCAACTTG
GAAGATGTTT TTATTAACCT TACCGGTAAA GAATGGCGGG AGGACAATTA A
 
Protein sequence
MDKTNAIISV KNLVKKYDDF IAVQGLSFDV YENEIFGLLG PNGAGKTTTL EIIETLREKT 
SGEIIVDGYS VEKDAGKIKR IIGVQLQAAG YYPNLNLVEL MELFSGLYNV DIKPMEMLEK
VNLQDKAKAK YKALSGGQKQ RFSIATTLIN SPKIIFLDEP TTGLDPQARR NLWDLIIDIR
NNGTTVVITT HYMDEAEQLC DRVAFVERGE IIALDTPDNL IDKLVNSGFE RKKEVKKANL
EDVFINLTGK EWREDN