Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0704 |
Symbol | |
ID | 8251792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 812144 |
End bp | 812914 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644934353 |
Product | ABC transporter related |
Protein accession | YP_003090988 |
Protein GI | 255530616 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.187193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAA CAAATGCCAT TATCAGTGTA AAGAACCTGG TAAAAAAATA CGACGATTTT ATTGCCGTTC AAGGCCTTAG CTTTGACGTA TATGAAAACG AGATTTTCGG GCTTTTAGGT CCTAACGGAG CAGGAAAAAC GACAACCCTG GAAATCATTG AGACCCTCCG TGAAAAGACC TCAGGAGAGA TCATTGTTGA TGGGTATTCG GTAGAAAAGG ATGCCGGCAA AATCAAAAGG ATCATTGGCG TACAACTGCA GGCCGCAGGC TATTATCCAA ACCTGAACCT GGTTGAACTG ATGGAACTCT TTTCAGGATT GTATAATGTT GATATCAAAC CGATGGAAAT GCTGGAAAAG GTAAACCTGC AGGATAAGGC CAAAGCCAAA TACAAAGCTT TGTCGGGTGG ACAAAAACAA CGTTTCTCTA TCGCTACCAC ACTAATCAAT TCGCCCAAAA TAATTTTCCT GGACGAACCT ACAACTGGTT TGGACCCACA GGCCAGGCGC AATTTGTGGG ACCTCATTAT TGATATCCGG AACAACGGGA CAACCGTAGT GATCACAACC CATTACATGG ACGAGGCTGA GCAACTGTGC GACCGTGTTG CCTTTGTGGA ACGCGGGGAG ATCATTGCCC TGGACACCCC TGACAATCTG ATAGACAAAC TGGTCAACAG TGGTTTTGAA AGAAAAAAAG AAGTTAAAAA AGCCAACTTG GAAGATGTTT TTATTAACCT TACCGGTAAA GAATGGCGGG AGGACAATTA A
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Protein sequence | MDKTNAIISV KNLVKKYDDF IAVQGLSFDV YENEIFGLLG PNGAGKTTTL EIIETLREKT SGEIIVDGYS VEKDAGKIKR IIGVQLQAAG YYPNLNLVEL MELFSGLYNV DIKPMEMLEK VNLQDKAKAK YKALSGGQKQ RFSIATTLIN SPKIIFLDEP TTGLDPQARR NLWDLIIDIR NNGTTVVITT HYMDEAEQLC DRVAFVERGE IIALDTPDNL IDKLVNSGFE RKKEVKKANL EDVFINLTGK EWREDN
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