| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0702 |
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| Symbol | |
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| ID | 8251790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 810192 |
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| End bp | 810884 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644934351 |
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| Product | MIP family channel protein |
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| Protein accession | YP_003090986 |
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| Protein GI | 255530614 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.256529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAT TAGCAGCAGA ATTTATTGGA ACCTTTTGGT TGGTTTTAGG CGGTTGCGGA
AGTGCCGTTT TAGCCTGTAA CTATCCTAAT GCAGGCATCG GCTTTCTGGG TGTTGCACTT
GCCTTCGGAT TAACTGTCGT AACCATCGCC TATGCTTTGG GACACATTTC GGGAGCACAT
TTAAATCCGG CAGTATCTGT GGGGCTGTGG ATAGGCGGAA GGTTTGATGG TAAAGACCTT
ATTCCATACA TTATATCGCA GGTATTAGGA GGTATTGCGG CAGCAGGCAT TCTGTATGTA
ATTGCCACCG GAAACGGGAG CAACATTGGT GGTTTTGCCA GCAATGGTTA TGGCGATCTT
TCGCCAGGGA AATACAGCAT GACTGCAGCC CTGGTCTGTG AAATTGTTAT GACCTTTATT
TTCTTACTGG TTATATTAGG TGCAACAGAT AACCGTGCGC CAAAAGGTTT TGCCGGTCTG
GCCATTGGTT TGTGTCTTAC CCTGATCCAC CTGATCAGTA TCCCGGTAAC CAATACTTCT
GTTAACCCGG CAAGGAGTAC CAGTCAGGCT ATATTTGTAG GTGGCGAGGC GCTTAGTCAG
CTCTGGCTGT TCTGGGTAGC CCCTATTGTA GGTGCTATTT TAGCTGGAAT CGTATATAAG
GCATTTTTCG CAGCAGGTTC GGAAACTGCT TAA
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| Protein sequence | MKKLAAEFIG TFWLVLGGCG SAVLACNYPN AGIGFLGVAL AFGLTVVTIA YALGHISGAH
LNPAVSVGLW IGGRFDGKDL IPYIISQVLG GIAAAGILYV IATGNGSNIG GFASNGYGDL
SPGKYSMTAA LVCEIVMTFI FLLVILGATD NRAPKGFAGL AIGLCLTLIH LISIPVTNTS
VNPARSTSQA IFVGGEALSQ LWLFWVAPIV GAILAGIVYK AFFAAGSETA
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