Gene Phep_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0613 
Symbol 
ID8251701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp727678 
End bp728016 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content37% 
IMG OID644934262 
Productribosomal protein L24 
Protein accessionYP_003090897 
Protein GI255530525 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.584465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA AAGTAACTAC ACCAAAAATA AAAATCCGTA AAGGTGATTT AGTAAAGGTT 
ATAGCCGGAG ATTCAAAAGG TCAGCAAGGC ACTGTGCTTT CAGTATTAAT TTCTAAAAGC
AGAATACTTG TAGAAGGTGT TAACCTTGTA TCAAAACATA CAAAACCAAA TGCTGCTACC
CCTAATGGTG GTATCATTAA GAAAGAGGCT GCTCTTCATA TTTCTAACGT GGCGTTAATT
GACCCTAAGA CAGGAGCAAC TACACGCGTT GGCAGAAAGC TTAATGCTGA TGGGAAATTA
GTTAGGGTAT CTAAAAAATC AGGAGAGGAG ATCAAATAA
 
Protein sequence
MKNKVTTPKI KIRKGDLVKV IAGDSKGQQG TVLSVLISKS RILVEGVNLV SKHTKPNAAT 
PNGGIIKKEA ALHISNVALI DPKTGATTRV GRKLNADGKL VRVSKKSGEE IK