Gene Phep_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0604 
Symbol 
ID8251692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp723657 
End bp723947 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content34% 
IMG OID644934253 
ProductRibosomal protein L25/L23 
Protein accessionYP_003090888 
Protein GI255530516 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTT TAAAGAAACC AATATTAACA GAGAAAGCTT CTGCATTAAC AGAAAAGTCT 
AACCGCTTTA CTTTTAAAGT AGAACACAAA GCAAATAAAT TGCAGATTAA GCAAGCCATA
GAGAAAATGT ACGGCGTAAA CATTTTAGCC ATTAATACAA TGGTTGTAAA TGGTAAAGTT
AAGTCCAGAA ATACTAAAGG TGGATTAGTT ACGGGACGTA GCCCGAAATA CAAGAAAGCG
ATTGTAACCC TGGCAGCAGG AGAAACGATT GATTATTACT CGAATATTTA A
 
Protein sequence
MEFLKKPILT EKASALTEKS NRFTFKVEHK ANKLQIKQAI EKMYGVNILA INTMVVNGKV 
KSRNTKGGLV TGRSPKYKKA IVTLAAGETI DYYSNI