Gene Phep_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0559 
Symbol 
ID8251646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp667911 
End bp669200 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content36% 
IMG OID644934208 
Producthypothetical protein 
Protein accessionYP_003090844 
Protein GI255530472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.666477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATTC TATATCAGGA GCCCGAACAG TGCCATTCTG AAGAAATGCA GGATATTATC 
TCAAAACCCC CAGCCTGGCT TTTAAGATGG GGGCTTTCAG TAATTTTTGC TGTTTTAATA
TTAATGATTA GTTTATCGGC ACTGATAAAG TACCCTGATA TAGTAAAAAC ACAGCTAAAA
ATAACTTCTG CCAATGCTCC TAAATCGGTT ATAAGTAAAA TTTCCGGTCA ATTGGTTAAA
GTAACGGTTC AAGAGAATCA GGCTGTCATA ACAGATCAGC CGCTTGCTTA TATTGAAAGT
ACGGCAAGCC ATGAGCAGGT CCTCCAATTA TTGGATGAAT TGAAAAACTT GCAAGCCAAT
CTGTCTGAAG GGATGATTCC GCTAAAATTA TTAGCTACTC CAAAAAATGT ATTCTTAGGA
GAATTGCAGA ATGCATACCA AAGTTTTTAT CAATCGTTTT TAATGTATCA ATCTTCCATT
GCAAATGGAT TTTATTTGAA AAAGAAAGTG TTTTTACAAA AAGATCTCTT GTCGATCCTT
GATCAAAAAG AACAATTGCT GGTACAACAA AAGCTTCAGG AAAAAGACTA TGAATTGGGA
AAGAAGGAAT TTGAAATGCA CCAAAAGCTT TTTGAACAAA AAGTAGAAGC CCCAATGGAA
TTGAAACGGG AGGAGAGTAA ATTTATAGCT AAAAGATATC CGCTTCAACA AACCGAATCG
GCATTGCTTT CCAATAGCAT CATCTATTCT GCTAAGGAAA AGGAGATTAT GGAACTGGAG
AACCTGATCA GCGAAGAAAA ATTAAAGTTT ATTCAAGCGC TGAATAATTT TATAAGCAAT
ATAGAAGATT GGAAGAAAAA ATATGTTCTT ACAGCACCAC AACCCGGTAA AGTAGCCTTT
TTGGGGATAG TACAAGAAAA GGAGTTTTTA AATGCCGGGC AGGAAGTACT ATATATCAAC
CCGGGCAGCA CTGATTTTTT CGGCGAGATA CATATACCGC AATATAAAAT GGGAAAGGTA
TATAAAGACC AGGAAGTGCT GATTAAATTA AAAAGCTATC CCTTTGAAGA GTATGGAATA
ATCCGGGGAA ACATCCAATC TATAGCTGAT ATACCTTATA AAGACAGTGT TTTTGTTTCG
AGAGTAAGTA TTAGCAACAA AGGCATGTCT GGCCTTAAGA GAAACATCCG GTTAAAAAAT
GGCATGATAG CAGATGCCGA GATCATTACA GAAGACGCCA CTTTATTAAA AAGATTAATA
CATAATATCA TTAAGATCAT TAACAAGTAA
 
Protein sequence
MPILYQEPEQ CHSEEMQDII SKPPAWLLRW GLSVIFAVLI LMISLSALIK YPDIVKTQLK 
ITSANAPKSV ISKISGQLVK VTVQENQAVI TDQPLAYIES TASHEQVLQL LDELKNLQAN
LSEGMIPLKL LATPKNVFLG ELQNAYQSFY QSFLMYQSSI ANGFYLKKKV FLQKDLLSIL
DQKEQLLVQQ KLQEKDYELG KKEFEMHQKL FEQKVEAPME LKREESKFIA KRYPLQQTES
ALLSNSIIYS AKEKEIMELE NLISEEKLKF IQALNNFISN IEDWKKKYVL TAPQPGKVAF
LGIVQEKEFL NAGQEVLYIN PGSTDFFGEI HIPQYKMGKV YKDQEVLIKL KSYPFEEYGI
IRGNIQSIAD IPYKDSVFVS RVSISNKGMS GLKRNIRLKN GMIADAEIIT EDATLLKRLI
HNIIKIINK