| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0542 |
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| Symbol | |
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| ID | 8251629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 647251 |
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| End bp | 648270 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934192 |
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| Product | L-asparaginase, type I |
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| Protein accession | YP_003090828 |
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| Protein GI | 255530456 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00519] L-asparaginases, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000289217 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCAAAA TACTCATCAT ATACACCGGC GGAACCATAG GTATGGTAAA TGATGCGGAT
ACAGGCGCGC TGATCCCTTT CAATTTTAAG CAGATCCAGC AAAATGTACC GGAACTGGCA
AGGCTAAACT ATAACCTGGA GGTTTATTCT TTTGATCCAA TAATGGATTC GTCGAACATG
CACCCGGATA TCTGGGCCGA AATGGCACAG CTGATCTTTA CCAGATATGA TGAGTTTGAC
GGATTTGTTA TCCTTCATGG TTCTGACACC ATGGCGTTTA CCGCCTCTGC ACTTAGTTTT
ATGCTTCAAA ACCTAAGTAA ACCGGTAATT CTTACAGGTT CTCAGCTGCC TATCGGAGAA
ATCCGGACAG ATGCCAAAGA GAACCTGATC ACTGCACTTG AAATTGCTGC AACCAAAGAA
AATGGTAAAG CAAAAATACC TGAGGTCTGC ATTTACTTTG ATTCCCAGCT GTTCCGTGGC
AACCGCTCTA TTAAGTACAA TTCTGAGAAG TTTGAAGCTT TCCGTTCGCC AAACTATCCG
GTCCTGGCCG AAGCTGGTGT GCACCTCACT TTTTTTAACA ACTATATACT ACCCCAGCCA
GAAAAGGAAC TGCAGGTATT GTTGGATTTT AACTCCAATA TTGGCGTTTT AAAAATGTAT
CCCGGCATTT CAGAACAGGC GGTAATGGCC ATTACCCATT CTTCGGTTGA TGCCATAGTT
TTGGAAACTT TTGGTTCCGG AAATACCACT ACTGCCGAAT GGTTCATTGC TTGTTTACAG
GAAGCCATCA CTAAGGGCAA AATCATAGTT GATATTTCTC AGTGCCAGCG GGGGTCGGTG
GAACTGGGTA AATATGAAAC CAGTAAAAAG CTGCAGGAAA TGGGCGTAAT AAGTGGTTAT
GATATGACCT TTGAAGCTAC TGTTACCAAG TTGATGTACC TTTTGGCACA GGGCCATGGC
AAAGATGAGG TGATTAAATT AATGGAGCAA TCGTTACGTG GAGAGCTAAC GCTGAGCTAA
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| Protein sequence | MTKILIIYTG GTIGMVNDAD TGALIPFNFK QIQQNVPELA RLNYNLEVYS FDPIMDSSNM
HPDIWAEMAQ LIFTRYDEFD GFVILHGSDT MAFTASALSF MLQNLSKPVI LTGSQLPIGE
IRTDAKENLI TALEIAATKE NGKAKIPEVC IYFDSQLFRG NRSIKYNSEK FEAFRSPNYP
VLAEAGVHLT FFNNYILPQP EKELQVLLDF NSNIGVLKMY PGISEQAVMA ITHSSVDAIV
LETFGSGNTT TAEWFIACLQ EAITKGKIIV DISQCQRGSV ELGKYETSKK LQEMGVISGY
DMTFEATVTK LMYLLAQGHG KDEVIKLMEQ SLRGELTLS
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