| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0524 |
|---|
| Symbol | |
|---|
| ID | 8251611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 634092 |
|---|
| End bp | 635258 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644934174 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003090810 |
|---|
| Protein GI | 255530438 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000000260703 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCAG TTATTGCGGA TGATTTTACA GGAGCGGCAG AAATTGGGGG AATTGCTTTA
AGACAGGGTT GGAATGCTAT TATAGATACA CGCGTACAAA AAGGCACGGA AACAGATATC
CTGATCATTG CAACAAATAC CAGGTCAAAA CCTCCGCAGG AAGCAAGAAA AACCATTCGT
GAGCTTACTT TACAGCTCCT CAGTCTTAGT CCGGAAATCA TTTATAAAAA AATAGACTCC
GTATTGAGGG GCAATGTAGG GGAAGAGCTT TTAGAGCAGA TGGCTGTTTC CCAGAAAAGA
AGGGCTTTAT TGATTCCGGC CAATCCATCT TTAAAACGTG TTATTAAAGA TGGAATATAC
TATTATGAAG GGCTGCCTTT AAAAGACTCA ACCTTTGCCC GCAATGTGAA ACACCAGATT
GGCTCTTCCA GGGTGATAGA TCTGATGGGT GATGGGGCTG GTAAGGATAC TGTTGTCATT
TCAAGAGCTG AACTTATGCC AGACAAGGGC TTGATTATTG GCAATACTAC TGATGAGGCC
GACCTGGACC ATTGGGCGGG CCGGGTTGAT GAGGAAACCA TAATGGCAGG CGGATCCAGT
TTTTTCAATG CGCTACTGAG AAAAATTAAA GTACATCCGT ATACCGACCC TGCCGGTTTT
GCATTTGGAA AGAAGGTAAT TTATGTATGT GGAAGTGCTT TTCCATTGAG CAGAAGTGTA
GTAGAGGATG CCCGTCAGGC AGGGCAATAT GTTTCATACA TGCCCTCAAG GATGTTTTGC
AAGCCAGCAG AAAAATCGGC ATACATGGCG CATTGGGAAA GAGAAATTCT AAAAGGGGTT
CAGCAGTCGG GAACAGTGAT AGTAGCCATT AATGTTATTG AAGAACCCAG GGTAGAAAAT
CTTTCGTCCG AGCTGGGAAA AACAATTGCA ACAGTAATAG CCAATGTCAT GCAAGGTGTT
CAGCTGGAGG AACTGGTGAT AGAAGGAGGG GCAACAGCAT CTGCCATCAT AGAGAAACTG
GAATACAGAA AATTTCATCC TACACAAGAA CTGGCTCCTG GTGTGATCAG AATGAAGGTT
GAAGAAAATA AAAGTTTACA CCTAACAATG AAACCTGGCA GCTACACCTG GCCATCTTCC
ATATGGAAGT ATTCACATAA ACCCTAA
|
|---|
| Protein sequence | MIAVIADDFT GAAEIGGIAL RQGWNAIIDT RVQKGTETDI LIIATNTRSK PPQEARKTIR
ELTLQLLSLS PEIIYKKIDS VLRGNVGEEL LEQMAVSQKR RALLIPANPS LKRVIKDGIY
YYEGLPLKDS TFARNVKHQI GSSRVIDLMG DGAGKDTVVI SRAELMPDKG LIIGNTTDEA
DLDHWAGRVD EETIMAGGSS FFNALLRKIK VHPYTDPAGF AFGKKVIYVC GSAFPLSRSV
VEDARQAGQY VSYMPSRMFC KPAEKSAYMA HWEREILKGV QQSGTVIVAI NVIEEPRVEN
LSSELGKTIA TVIANVMQGV QLEELVIEGG ATASAIIEKL EYRKFHPTQE LAPGVIRMKV
EENKSLHLTM KPGSYTWPSS IWKYSHKP
|
|---|
| |