Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0502 |
Symbol | |
ID | 8251589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 602676 |
End bp | 604709 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644934152 |
Product | RagB/SusD domain protein |
Protein accession | YP_003090788 |
Protein GI | 255530416 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00011099 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAATT TTAATAACGA TCTAAGAATG AAGAATATAA TGAGAATAAT AGTAGCCTTT TCCCTGATGG GAATGATGAG CTGCAAATAC CTGGATGTGG TACCAAATGA CACAGCGACA TTGGACCACG CCTTCTCCAA TCGCTCCGTA ATGGATAAGT TTCTGAGGAC ATGTTACTCA CACTTGCCAG ATCCGACCAA TCCATTTTAC TACCCTGCCT ATTTTACCAG CAGGGACGAG TTTGACTGGA GGAGCGATAG CAGGGCTGGA AATACGCCCG CCGGCCAGAT TTCCCGTGGA CTTCAAAACA CCAATAATCC ACTGCAGGAT TACTGGACGG GAGGTCAGGG AGGTAATTCA ATGTATAGGG CCATACGTGA CTGCAATATT TTTCTGGAAA ACGCACATAT TCCCCGTGAT ATCGATGAAC TGGAACGCGC CCGATGGATC GCTGAAGTGA AATTCCTAAA GGCCTATTAC CATTTCTTTT TAATGCAATT GTATGGCCCC ATCGTGTTGG TGAAAGAAAA CCTGCCCTTA TCGGCTACTC CTGAGGAAAC GAAAGTATAT CGCGAACCAG TGGATGAATG TGTAGACTAC ATCGTGCAGT TGCTGGATGA GGCTGCGGTT GATTTACCAT TGGCACTTCC AGATCCGGCG ACAGAACAAG GCCGGATTTC CAAAACTATT GCATTGGGCA TCAAGGCGAA AGTCTTAGCC TGGGGAGCCA GCCCATTATT TAACGGCAAT CCGGATTATG CAGGTTGGAT CGATAAACGC GGGAAACAAT TGATATCCAC TACTGCTGAC CCTAAAAAAT GGGAGAGAGC TGCTGTAGCC ATAAAGGAGG CAATTGATGC TGCCCATGCT GCCGGACACC GCTTATATGA ATTCAACAAG TTCGCGGGTG GCGCCCAAAC ATTCGCGATG AATGACAGTT TGGTGCAGTT GATGACTGTC AGAAAGGCGA TCACTGAATC GATCGACCGA AATACAGGAG TAATCTGGGC CACACAGGAA CAATTTGCAA ATGGTAAAGG TGGTTCCAGC TTTGCTCCGC TAGGAAATAT GCTTGCAAGT CTTTTTCCGG TATTGTATAG TACGGATCAG CCTAGTTATG TCAACTACAT GTCTGCTTCC TGGCATATGG GTGAATTGTT TTATTCCAAC AAGGGTGTTC CGATTAATGA AGATAAAACG TATGACTACA ATAACAGATA TAGCTTAAAA CGGGCAACGT TGGCAGATCA TCATGAATCT TATATTGCTA CCGGCGAAGT AACCGTCCTT CTTCACTTCT TCCGGGAGCC GCGTTTTTAC GCCAATTTAG GGATCGACAG AGGATTCTTT GAGCTATCCA CTACTACAAC CAATGGCGGT GTCTCATTTG CCCCCTTCAT TAAGAGTCGT CCCGATGAGG TTGGACCTGC AGCGGGCCAT GGTGCATATA CGCCTAAAAA GATTATCCCC TTTGAGTCAT CCGCCAGCCA GGGAGATGTG AATAAGCGAT ATACAGCATA TCCTTATAAC TTTCCTTTAC TACGCTTATC AGATCTTTAT CTCCTTTACA GCGAGGCACT GAACGAAACA AAGGGCCAGC CAGATGCAGA GGTCTACAAA TGGATTGACG AGGTGCGCGC TGTGGCGGGA TTGAATGGCG TAGTACAGTC GTGGCAGCAA GCGGCCTTTA ATCCTGACGC ACCATCAAAT AAAAATGAGA TGCGTAAAAT TATTCAAAGA GAGCGCCTGA TCGAGCTCTC ATTTGAGGGA CAACGCTTTT GGGATATACG TCGATGGAAA ATGGCTGCTC AGTATTGGAA CCTCCGTCCA ATGTCCTGGA CTCCATCAAG AGAAACTGAA AAATTTTATG TTCCTTTCGT CTATAGTCCA GTCGTACGCC AGGTTACATT TAGAGATTAC TTGTATCCAA TCAGAGACTA CGACTTACGG ATTAATCCAA ATTTGGTTCA AACATATGGT TGGGTAATAA CGCTAAGTAC AGCATTGGAA TTATTAATAA AGATTAATTT ATGA
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Protein sequence | MLNFNNDLRM KNIMRIIVAF SLMGMMSCKY LDVVPNDTAT LDHAFSNRSV MDKFLRTCYS HLPDPTNPFY YPAYFTSRDE FDWRSDSRAG NTPAGQISRG LQNTNNPLQD YWTGGQGGNS MYRAIRDCNI FLENAHIPRD IDELERARWI AEVKFLKAYY HFFLMQLYGP IVLVKENLPL SATPEETKVY REPVDECVDY IVQLLDEAAV DLPLALPDPA TEQGRISKTI ALGIKAKVLA WGASPLFNGN PDYAGWIDKR GKQLISTTAD PKKWERAAVA IKEAIDAAHA AGHRLYEFNK FAGGAQTFAM NDSLVQLMTV RKAITESIDR NTGVIWATQE QFANGKGGSS FAPLGNMLAS LFPVLYSTDQ PSYVNYMSAS WHMGELFYSN KGVPINEDKT YDYNNRYSLK RATLADHHES YIATGEVTVL LHFFREPRFY ANLGIDRGFF ELSTTTTNGG VSFAPFIKSR PDEVGPAAGH GAYTPKKIIP FESSASQGDV NKRYTAYPYN FPLLRLSDLY LLYSEALNET KGQPDAEVYK WIDEVRAVAG LNGVVQSWQQ AAFNPDAPSN KNEMRKIIQR ERLIELSFEG QRFWDIRRWK MAAQYWNLRP MSWTPSRETE KFYVPFVYSP VVRQVTFRDY LYPIRDYDLR INPNLVQTYG WVITLSTALE LLIKINL
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