Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0484 |
Symbol | |
ID | 8251571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 579157 |
End bp | 580269 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644934134 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_003090770 |
Protein GI | 255530398 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTT CAAAACCAAC ATTTATAGAT AAGTTAGTCC GATTAGGGGC TATAGGGTTG GCCACTGCAC TTGCGCTGGG GATTTTGGCA GGTAATATAG ATCCGCGCAG TTTTCAACTG ATCGCTTTTT TTGGACTGGC CTATCCTTAT GTCCTTTTGC TCAATATAAT AATGATTGCA TGGTGGTGCA TTCGGAGAAG GTGGCTGTTC GCCGCCACTA CACTTGTCCT CATTTTGCTG GGCTGGCATT CATTGACCAC TACTTTTGGA TTTATTGGTG AAAAAGGGCT CGGTCCCAAG GCAGATCCGG GACTGATCCG TATGATGACC TATAATGTGC ATAGTTTTAA GCCTTATGGA GAGGGAAACA TTGAATCTGT AAAGCAGCAG ATGTTAGATC TGATAGAAAA CGAGAATCCG GATATCATCT GTTTTCAGGA GTATTTTACC CGTAAGAAAG GCCCGTATGA CATTACAGAC AGTCTGAAAA GGATATTAAA CAAACCCTAT CATTATTTTG AACCCATTTC TCAAAATGAT TATGAAGCTA CCGGGCTGGC CATTTTTTCC AAATATCCTA TTAAAAATAA AGGTACCATA GCTTTTAATA AAGTTTACCG GGGCAATAGC AGTATTTATG TTGATGTTAC AGTTAAAAAT AAAATGTTCA GGATTTATAA TGTCCACATG CAGTCTATAT CCTTTCAGGA ACAGGACTAT ATGTACCTGG ACCAGGTAAA GTACCAGATG GATCCTAAAC TTTATGCCTC AAAAAGAATC CTGGTAATGT TAAGAAACGC CTTTTTGAAG CGCAGTGAAC AGGTGGACAT CATGAAGGCT CATATAAAAA CCTGTGAACT GCCTTTCATT ATTGCCGGTG ATTTTAACGA TACCCCTGCA TCTTACGCCG TAAAGCAAAT GACAAAATCA TTAAAAAATA CTTTTAAAGA ACAGGGAACC GGCTTTGGGA AAACTTATAA TGGTAAATTT CCAAACTTCC AGATCGATTA TATTGCCACT ACACAAAACT TTGATGTGAT GAACTACCGC ATCATTGAAG CTAAATTATC AGATCACTTC CCTGTTCGCA GCGACCTTAG ATTAAACCCC TAA
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Protein sequence | MKRSKPTFID KLVRLGAIGL ATALALGILA GNIDPRSFQL IAFFGLAYPY VLLLNIIMIA WWCIRRRWLF AATTLVLILL GWHSLTTTFG FIGEKGLGPK ADPGLIRMMT YNVHSFKPYG EGNIESVKQQ MLDLIENENP DIICFQEYFT RKKGPYDITD SLKRILNKPY HYFEPISQND YEATGLAIFS KYPIKNKGTI AFNKVYRGNS SIYVDVTVKN KMFRIYNVHM QSISFQEQDY MYLDQVKYQM DPKLYASKRI LVMLRNAFLK RSEQVDIMKA HIKTCELPFI IAGDFNDTPA SYAVKQMTKS LKNTFKEQGT GFGKTYNGKF PNFQIDYIAT TQNFDVMNYR IIEAKLSDHF PVRSDLRLNP
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