| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0454 |
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| Symbol | |
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| ID | 8251539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 538758 |
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| End bp | 541292 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934102 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_003090740 |
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| Protein GI | 255530368 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.546785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAA GAAGAGAATT TATCAGGAAA TCCCTGTTGC TATCCGGTGC TGCCGGGCTT
TCAACTATGC TGCCCGCATC TATACAAAGG GCACTTGCCA TTAACCCCAG GTTGGGCAGC
AGCTTTCTTG ATGCAGAACA TATTGTGATA CTCATGCAGG AAAACAGGTC GTTCGACCAT
TGTTTTGGTA CCTTGCAGGG CGTAAGGGGT TTTAACGATC CGCGTGCAGT TACCTTACCT
AATAAAAAAC CTGTATGGAT GCAAACCGAT GCTGCAGGAA ATACTTATGC CCCTTTTCGC
TTAAACATTA AAGATTCTAA GGTTACCTGG ATCGGTTCCC TGCCGCATTC GCGGGCAAGC
CAGGTAGATG CTTATAACAA AGGCAAGTAC GATGGCTGGC TGACCGCGAA AAAATCCGGC
AACAAAAAAT ATTCGGGCAT GCCTTTAACT TTAGGGCACT ACAACCGGGA GGATTTGCCT
TTTAACTATG CTATGGCAGA TGCTTTTACG GTTTGTGACC AGAATTTTTG TTCGGGAATG
ACCAGCACTA CACCCAACAG GTCTTTTTTC TGGACAGGTA AAATCAGTTA TGACCTGGAT
GGATTGCAAA AGGTGAACAT CAGGAATGAT GATTTTAGCT ATGGTAAATT GCCATGGCGC
GCTTTCCCGG AGCTGCTGGA AGAAAACAAT ATTCCATGGA GCTTTTACCA GAACGACTTA
AGCTGCGGTG GCGGTTATAA AGGCGAAGAG CGTGCCTGGC TGGCCAATTT TGGCTGTAAC
CTGCTGGAGT TTTTTGCTGC TTACCATGTT AAGTTCTCAT CACGCTATGT AAAAAACCTG
CAGAATCTGG TAGAGACCCT GCCTGAAGAG ATCAATAAAC TGCAGGAAGC AAGCCCTTCA
AGTGAAGCCG CTGCAAAGAA GATAAAAGCC GATCTTAAAA ATAAACTGGA GGCGCTGGAC
AATGCCGCTG CAGAACTGAA AAAATGGAGT ACGGAGGAGT ACAATAAGTT GTCTGATAAG
CAAAAGCGCC TGTTTAAAAA TGCTTTTGTG ATCAATTCAG GAGATCCGGA TTACCGCAGC
ATCACCACTT TAAGCTATAA TGACGGCGAC ACCAAACGTG AAGTGACCGT GCCTAAGGGG
GATGTGCTTT ACCAGTTCAG AAAAGATGTG AATACGGGTA AATTGCCTGC CGTATCCTGG
CTGGCCGGAC CACAGAATTT TTCGGATCAT CCCAGTGCGC CCTGGTATGG CGCATGGTAT
GTTTCGGAAA TACTGGACAT CCTGACCAAG AATCCGGAAG TCTGGAAGAA AACAATCTTT
ATCACTACTT ACGATGAAAA TGATGGTTAT TTTGATCATG TAAAACCATT TTCTATCCCT
GACAATAAGG TTGCTGGAAC CGGCAAGGTA TCTGCAGGGA TTGATACAGA GGTAGAACAT
GTAAGGCTGG CCAATGAACT TAAACAGGGC ATACCGGAAA AGGCCGCAAG AGAAGCACCT
ATTGGTCTCG GTTTTCGCGT GCCTATGCTG ATTGCTTCGC CATGGAGCAG GGGGGGCAGG
GTATGTTCAG AAGTATTTGA CCATACATCT ACCCTGCAAT TTCTGGAAGT TTTTTTCAGT
AAGAAGTTAA ATAAAGAAAT AAGAATTGAG AACATCAGTA AATGGCGCAG GGCGATATGC
GGCGACCTGA CTTCGGTGTT TACGCCTTTT AACGGGGAGA AAGCGGATCA GATAGCTTTT
CTTAAAAGGG ATGCTATGGT GGAAAGCATT TATAATGCTA AATTTAAAGA CGACCCTTCA
GGCTTTAAAA AGCTAAGCAA TGGAGATGTT GCTGCTTATG TGGCCAATCC GCTTTCCGGA
AAGGTTATGT CGGTACAGGA AAAGGGGATA CGACCTTCCT GCGCATTGCC TTATGAGCTT
TATGCCGATG GACAATTGCA GGCCGATAAG CAGAATTTTG AAATAAAGTT TAAGGCTGGT
AATGCGGTTT TTGGCAAAAA AGCTGCAGGT TCTCCTTTTA CCGTATATGC ACCTGTTGCG
TTTAGTGATG CCGAAACGGG TACGCAGGTG TGCCGGAACT GGGCTTTTGC CGCTGTAGCT
GGCGATACAG TAACCTACAG CTGGCCGCTG GCAAACTTTG AAAATGGCAA ATATCACCTT
AAAGTCGATG GGCCAAATGG TTATCACCGG GAATATATAG GCTCGGGTAA CAATCCGGAT
TTAACAGTGC ATTGCGAATA TGAGGCTGCA AATGGCAAGC TGACCGGTAA CGTACTGTTA
AAAGTAATCA ATGCAAACCG ATCAAAAAGT TATGCCATAG TGATTAAAGA TCTGGGTTAC
CGTAAAAATG ACCTTAAAAA GAACATTGCT GCGGGCAGCA ATCAGGAGAT TGTACTGGAC
CTGAAGCAGA TGCATGGCTG GTACGACTTT AGTTTAAGCG TAGAGGGCGC CGAAAATTTT
GTACAAAGGT ATGCAGGAAG GGTAGAAACC GGTGTGGCCA GTTTCAGTGA TCCGGTTATG
GGAGGAATTG TTTAG
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| Protein sequence | MESRREFIRK SLLLSGAAGL STMLPASIQR ALAINPRLGS SFLDAEHIVI LMQENRSFDH
CFGTLQGVRG FNDPRAVTLP NKKPVWMQTD AAGNTYAPFR LNIKDSKVTW IGSLPHSRAS
QVDAYNKGKY DGWLTAKKSG NKKYSGMPLT LGHYNREDLP FNYAMADAFT VCDQNFCSGM
TSTTPNRSFF WTGKISYDLD GLQKVNIRND DFSYGKLPWR AFPELLEENN IPWSFYQNDL
SCGGGYKGEE RAWLANFGCN LLEFFAAYHV KFSSRYVKNL QNLVETLPEE INKLQEASPS
SEAAAKKIKA DLKNKLEALD NAAAELKKWS TEEYNKLSDK QKRLFKNAFV INSGDPDYRS
ITTLSYNDGD TKREVTVPKG DVLYQFRKDV NTGKLPAVSW LAGPQNFSDH PSAPWYGAWY
VSEILDILTK NPEVWKKTIF ITTYDENDGY FDHVKPFSIP DNKVAGTGKV SAGIDTEVEH
VRLANELKQG IPEKAAREAP IGLGFRVPML IASPWSRGGR VCSEVFDHTS TLQFLEVFFS
KKLNKEIRIE NISKWRRAIC GDLTSVFTPF NGEKADQIAF LKRDAMVESI YNAKFKDDPS
GFKKLSNGDV AAYVANPLSG KVMSVQEKGI RPSCALPYEL YADGQLQADK QNFEIKFKAG
NAVFGKKAAG SPFTVYAPVA FSDAETGTQV CRNWAFAAVA GDTVTYSWPL ANFENGKYHL
KVDGPNGYHR EYIGSGNNPD LTVHCEYEAA NGKLTGNVLL KVINANRSKS YAIVIKDLGY
RKNDLKKNIA AGSNQEIVLD LKQMHGWYDF SLSVEGAENF VQRYAGRVET GVASFSDPVM
GGIV
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