Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0434 |
Symbol | |
ID | 8251519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 508123 |
End bp | 509979 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644934082 |
Product | Beta-N-acetylhexosaminidase |
Protein accession | YP_003090720 |
Protein GI | 255530348 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATCA AAAGAATGTT TTTTATGCTG TGCCTGATCT GGATGAGTGC AGCGAACCCG GCATTTAGCC AGCGGGTATC CATTATTCCG CAACCTTTAA GTGTTGCTGA ACTTCCAGGA AACTTTAAAA TCAATTCCCT TACCAAAATT ACTTATGATG CGGGCAATTC CGACCTGAAG TCGGTAGGCC TTCAATTTTC CGATCAGCTA AAAAAGCTGT GCGGTTACGC CTTAAAAGTA CTTCCGGCTA CAGCTGCTAC AGGGAGCAAT GTAATTGTGC TGACCACAAA AAACGCCGTA GACAGTCTGG GTGATGAAGG TTATACCTTA ATTGCCAATG CAAAGGGCGT TACCATCAGC GGTAAAAAAG CACATGGCGT ATTTTATGGG GCCCAAACCC TGTATCAGCT TTTGCCGGTA AAAGGAAAAA ATAATACCCT TGTTGCTGCA CCGCTAATTC CGGCGGTAAA AATTGCCGAT AAGCCACGCT TTGGCTGGAG GGGAATGATG CTTGACGTGG GCCGTTATTT TTACTCCGTG GAGTTTGTTA AAAAATACAT CGACAACCTC GCTTTACATA AACTGAATGT GTTTCACTGG CATTTAACCG AAGACCATGG CTGGCGCATC GAGATTAAAA AATACCCCAG ACTCACTTCA ATAGGCGCAT GGCGCAATGG AACGCAGTTT GCCAACAACC AGATCGATAA CAACCCGCAT GGCGGGTTTT ACACGCAAGA CCAGATCAGG GATATCGTTG CCTATGCGGC AAAACGTTAT GTAACGGTGG TTCCCGAAAT TGAAATGCCG GGCCATGCTA CGGCAGCCCT GGTGGCCTAT CCTAACGTTT CCTGCACAGG CGGGCCTTTT AAAATGCTGA CAGGATGGGG TATCCAGAAA GAAGTTTTCT GTGCCGGAAA AGAAGAGACC TTTAATTTCC TGGAAGATAT CCTTTCGGAA GTTGTAGCAC TCTTTCCCGG TAAATTCATC CACATCGGCG GAGATGAATG TCCTAAAGAC CGTTGGAAAG TTTGCCCAAA CTGCCAGGCC AGGATGAAAA AAGAAAACCT GAAAGACGAG CATGAACTGC AAAGCTATTT CATCAGGCGC ATAGAAAAAT TCCTGACCAC CAAAAATAAA AGCATTATTG GCTGGGATGA AATTCTGGAA GGCGGCCTGG CACCTAATGC TGCTGTCATG TCCTGGAGGG GCACCGAAGG TGGTATTGCT GCAGCCAAAC AATTGCATGA TGTAGTGATG ACCCCCTACG ATTTTCTTTA CCTGGATTAT TATCAGGGCG AACCCTATCT GGAACCAAAG GCAATAGGTG GTAATCTGCA GCTGGAAAAG GTATACAACT ATGAGCCTGT ACCAGCAGTG CTTACTGCCG AGCAGGCAAA ATATATTAAA GGCGTACAGG GCAATGTATG GGCAGAATTT ATCCATTCGC CCGAAAAAGT AGAATACATG GCCTTTCCAC GCGCTGCTGC GATGGCCGAA CTGGCCTGGA CCATACCAGC CCGGAAAAGC TGGACTGATT TTAGCCGCAG GATAGAAAAG CAATACCAGC GCTACGATGA CCTGGGCATC AATTACGCCA GAAGCGCCTA TAATGTATGG CATACCGTAA CGGTCGACAG TGTGGCCAAT AAAGCAAGGG TATCCTTTAA AACCAATAGT TATCAGCCGC AGGTGCGCTA TAGCCTGGAT GGTTCAGAAC CAACAGTAAA TTCGCTGGCC TACAGCAAAC CCTTCGAAGT TAAATTACCG GTCACCATTA AAGCAGCTAC TTTTAAAGAT GGCCGCCGCA TGGGGGCAAT CAGTTCAAGG TCAATATTTG TAGATCAGAA TAAATAA
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Protein sequence | MMIKRMFFML CLIWMSAANP AFSQRVSIIP QPLSVAELPG NFKINSLTKI TYDAGNSDLK SVGLQFSDQL KKLCGYALKV LPATAATGSN VIVLTTKNAV DSLGDEGYTL IANAKGVTIS GKKAHGVFYG AQTLYQLLPV KGKNNTLVAA PLIPAVKIAD KPRFGWRGMM LDVGRYFYSV EFVKKYIDNL ALHKLNVFHW HLTEDHGWRI EIKKYPRLTS IGAWRNGTQF ANNQIDNNPH GGFYTQDQIR DIVAYAAKRY VTVVPEIEMP GHATAALVAY PNVSCTGGPF KMLTGWGIQK EVFCAGKEET FNFLEDILSE VVALFPGKFI HIGGDECPKD RWKVCPNCQA RMKKENLKDE HELQSYFIRR IEKFLTTKNK SIIGWDEILE GGLAPNAAVM SWRGTEGGIA AAKQLHDVVM TPYDFLYLDY YQGEPYLEPK AIGGNLQLEK VYNYEPVPAV LTAEQAKYIK GVQGNVWAEF IHSPEKVEYM AFPRAAAMAE LAWTIPARKS WTDFSRRIEK QYQRYDDLGI NYARSAYNVW HTVTVDSVAN KARVSFKTNS YQPQVRYSLD GSEPTVNSLA YSKPFEVKLP VTIKAATFKD GRRMGAISSR SIFVDQNK
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