| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0424 |
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| Symbol | |
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| ID | 8251509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 496901 |
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| End bp | 497386 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934072 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003090710 |
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| Protein GI | 255530338 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.582386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTTA TGGATGAAAA GCAGTTCCTC ACATTAATTG ATGGGCACCA GGGTATTATC
CATAAGGTTT GCAGGCTTTA CCGTGACAGC CCGGAAGATC AGGAAGACCT GTTCCAGGAG
ATCATCTATC AGCTATGGCG GGGGATCCCT TCTTTTAAAG GCGAAGCCAA AGTAAGTACC
TGGATCTATC GTGTAGCTTT GAACACTGCT ATTGCCGCTT TCAGAAAAAA GAAACCGGAA
ATTGAATACA CTATTGCTTT ACCCGATTTA CTGGAAGAAC CGCAAAGTGA AGAGCTGGCA
TTAAGGCAGG AGCGCTTATT TGCAGCCTTA AAACAGCTGG ACGAGAGTGA AAAGGCTATC
ATTACCCTCT ATTTTGAAGA ACTCAGTTAC CAGCAGATTG CGGAAGTAAC AGGCATTAAT
GAAAATTATG TTGGTGTTAA GCTCAACAGA ATTAAAAACA AGATTCAAAA ACTTTTAAAA
TTATAA
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| Protein sequence | MQVMDEKQFL TLIDGHQGII HKVCRLYRDS PEDQEDLFQE IIYQLWRGIP SFKGEAKVST
WIYRVALNTA IAAFRKKKPE IEYTIALPDL LEEPQSEELA LRQERLFAAL KQLDESEKAI
ITLYFEELSY QQIAEVTGIN ENYVGVKLNR IKNKIQKLLK L
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