| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0379 |
|---|
| Symbol | |
|---|
| ID | 8251464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 449705 |
|---|
| End bp | 450493 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644934027 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003090665 |
|---|
| Protein GI | 255530293 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACA AAGTTGTCTG GATTACCGGC GCATCATCCG GTATTGGAGA AGCCCTCGTA
TATGCCTATG ATAAAATGGG CGCAAAGCTG ATCTTATCCT CACGCAATCG CGACGAACTA
TATAGGGTTA AAAACGCCTG CAAAAGTCCG GTGAATATCC ATGTACTGCC TTTAGATCTG
GAAAACACCG CTGCTCTCGA GAGCAAAGCT GAAGAAGCCA TACGGATTTA CGGACACATC
GACCTGCTGA TCAACAGTGG AGGCATTAGT CAAAGAAGCC TGGCATTAAC CACAGAAATG
CAGACAGAAC AACGGTTAAT GAACGTAAAC TTCTGGGGAA CCGTTATATT AAGCAAGGCT
GTCATCAAAA ACATGATTGC CCATGGTGGT GGAAAGATCG TTTGTATCAG CAGTCTTGTA
GGAAAGTTTG GCACACGTTT AAGGTCAGCC TATTCGGCCT CCAAACATGC CCTGCATGGA
TATTTCGACT CATTGCGTTC AGAAGTATTC GACAAGAACA TACAGATCAC TATCGTATGC
CCGGGCTTCA TCAAAACTCA GGTCTCCATA AATGCCCTGA CAGCCAATGG CAGTCCACAA
GGTACGATGG ATAGTGGTCA GGAAAACGGC ATGTTACCTG AAGAATGTGC AAGGCAAATC
GTTCAGGCTG TTCAGCAGCA GAAAGAAGAG GTATATATTG GTGGTAAAGA AATAAAAGGT
GTCTGGTTTA AGCGCTTCTT TCCACTCCGG TTTTCCAGAT ACATGAGAAC AGCAAAAGTA
ACCAGGTAA
|
|---|
| Protein sequence | MKNKVVWITG ASSGIGEALV YAYDKMGAKL ILSSRNRDEL YRVKNACKSP VNIHVLPLDL
ENTAALESKA EEAIRIYGHI DLLINSGGIS QRSLALTTEM QTEQRLMNVN FWGTVILSKA
VIKNMIAHGG GKIVCISSLV GKFGTRLRSA YSASKHALHG YFDSLRSEVF DKNIQITIVC
PGFIKTQVSI NALTANGSPQ GTMDSGQENG MLPEECARQI VQAVQQQKEE VYIGGKEIKG
VWFKRFFPLR FSRYMRTAKV TR
|
|---|
| |