Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0358 |
Symbol | |
ID | 8251443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 423031 |
End bp | 425169 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644934006 |
Product | membrane-bound dehydrogenase domain protein |
Protein accession | YP_003090644 |
Protein GI | 255530272 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02604] putative membrane-bound dehydrogenase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCTC TGAACCTTAA AAGAAACCTG ATATGGATTA CTATGGTGGC AGTTGTATTT GCCTCCTGTT CAAAAAAGAA AAAGTATGAA GAGTCCCGAA CGGCCGAGGA ATCTATCAGT ACTTTTGATA TGCTGAATGG TTTTAAAGCC GAAGTATATG CTACCGAACC GAATGTCACC GATCCTGTTG AGCTCACGTT TGATGAGGAG GGCAATGCTT ATGTCATTGA GATGGGTGAT TATCCGTATA AGGCGGTAAA AGGACAGGGT AAGGGCCAGA TCCGTAAGCT GATCGATAAG GACCACGATG GAAAAATAGA TACCTCTGTT ATTTTTGCCA GCAAACTTGA AAGTGGCACC AGTATATTGC CATGGGAAGG CGGCTTGCTC GTCACCGCTG CACCCAATAT TTTCTTCATG AAAGATACCA CTGGCGACGG TAAGGCTGAC ATTAAAGAAG TGCTGTTTAC CGGCTTCTTT GAAGACAATT CTGAAGCTCA GATTACGAGT TTGAGGTATG GTATCGACAA CTGGATCTAT GCCAATAATG GCGGGATGGC CGGTGAAATT ACTTTTAGCC GTAAACCAAA TGCCCCTGCC TTACAGATCA AAGGGGGCGA CTTCCGGTTC CGACTGGATA AAGGCCTGTT TGAAGTAGAG TCTGGTGCCG GTCAGTATGG CTTGGATATG GACGATCTTG GACACCGGTT TTATACCAAT AATTCCAGGC ACATTTCCAA TTCGCCCATT GCCGGCAGGT ACCTGAAACG CCACGATCAT ATGAACTTTA AGTCTGTAGT GAACATTTAT GCTGCTGAAC CGATCATGTA CCAGGCTACC CCTGCACCAT GGTGGCGTGC AGAACGTACA AAAGCACGCA ATGCGAATTT TGAAAAAGAA AAACTGGATA GAAAGGAATA TGCTGAAGGA CGTTTTACTG CAGCTTCGGG CGGAACGATT TATGCCGGCG ATGCCTATCC GAAAGAATTT TATGGCAGTA GTTTTATTGG CGATGTAGCC GGAAGCCTGG TGCACCGCGA TATTATTGAA ATTGGCAACG ACGGGCCTTT TTTTAATGCA AAACGCAGCG CAAAAGAAGA GAAACGTGAA TTCATAGCTT CAACAGATCC ATGGTTCAGG CCATGTAACT TTACCCTGGG CTATGATGGT AACCTGTATA TGGTGGATAT GTACCGTCAG CACATCGAAA CACCAGTATC TATTCCTGAT TCCCTGAAAA TGGATATGGA CTTTATGCGT GGCAATAATT TTGGCCGCAT TTACCGTATT GTTTCTACTG AAGCAAAAGC ACAGAAATCA TTGCCACCGC ACATGCGGAA CCAATTTGGT CAGGAACTGG TGGCTTACCT GGGTCATCCA AACCGCTGGT GGCGTTTAAA TGCCCAGCGC ATCATCATTG AGCGTAAAGA CAAATCGGCT ATCCCGGCTT TGGTCAAAAT GTTCAACGAG GATAAAAACC CGATCAGCAG GCTGCACGCC CTGTATACTT TAGAAGGCCT GGATGCCCTG AATGCCGAGC TGGTAGGTAA AGCATTAACC GATGCCAATG CAGGTTTAAG AGAGCATGGC GCCATCCTTT CAGAGCGCTT CCCGGAACTG GCGGGTCAGC TGGTAAAAAC CATTGCTGAT CCTGTAGGAC TGGTTTCTTT ACAGGCAACA TTAAGCGCCG GACAGCTGAA GGCTGGACAG GTAGTACCTG CTTTTGCCAG TCTCATAGAA AAGAAATATA AAGACATGTG GTTCAGCAAT GCCGTGTTGA GCTCAAATCC CGGTTCATCA TTTGAACTGG TAGATCAGCT GGCCAAAAAT GGGGCTTTCT TTACTGCTCC CGATTCTGCG AAACTGGCTT TTGTAAAAAA TATTTCGACC ATTATCGGCT CCCGGAAATC GGGTGCAGAG GTATCAAAAC TGCTTGCTTT CTTCTCTTCG CCTGCTGTAA AAACAGATCA GAAATGGGTG CAGGAAGGTT TGAATGGCCT GGCTACCGGA TTTAAAAAAT CTAAAAACAA GGAAGGTAAT GCAGCCATTG CCGCTACGCT TAAAAAGCTG GAAGGCAGTG CGGTTGCAGA AAATAAAAAG GCATATCAGG ATGCTGCCGA AGCTTTAAAA GGAAGTTGA
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Protein sequence | MKALNLKRNL IWITMVAVVF ASCSKKKKYE ESRTAEESIS TFDMLNGFKA EVYATEPNVT DPVELTFDEE GNAYVIEMGD YPYKAVKGQG KGQIRKLIDK DHDGKIDTSV IFASKLESGT SILPWEGGLL VTAAPNIFFM KDTTGDGKAD IKEVLFTGFF EDNSEAQITS LRYGIDNWIY ANNGGMAGEI TFSRKPNAPA LQIKGGDFRF RLDKGLFEVE SGAGQYGLDM DDLGHRFYTN NSRHISNSPI AGRYLKRHDH MNFKSVVNIY AAEPIMYQAT PAPWWRAERT KARNANFEKE KLDRKEYAEG RFTAASGGTI YAGDAYPKEF YGSSFIGDVA GSLVHRDIIE IGNDGPFFNA KRSAKEEKRE FIASTDPWFR PCNFTLGYDG NLYMVDMYRQ HIETPVSIPD SLKMDMDFMR GNNFGRIYRI VSTEAKAQKS LPPHMRNQFG QELVAYLGHP NRWWRLNAQR IIIERKDKSA IPALVKMFNE DKNPISRLHA LYTLEGLDAL NAELVGKALT DANAGLREHG AILSERFPEL AGQLVKTIAD PVGLVSLQAT LSAGQLKAGQ VVPAFASLIE KKYKDMWFSN AVLSSNPGSS FELVDQLAKN GAFFTAPDSA KLAFVKNIST IIGSRKSGAE VSKLLAFFSS PAVKTDQKWV QEGLNGLATG FKKSKNKEGN AAIAATLKKL EGSAVAENKK AYQDAAEALK GS
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