| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0354 |
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| Symbol | |
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| ID | 8251439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 417856 |
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| End bp | 419280 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934002 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_003090640 |
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| Protein GI | 255530268 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000278055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGC TGATGAAACC TAACACAAAC AACCAAAACA ATGAAACCAG AAGGAAATTT
ATCAAGTCGA CCGGTATTTT TGCTGCTGGT TTAGCTTTAG TTCCCTCATT TTCCATGGCA
TCCGCTAAGG ATAAAGGCGT ATGGAGTTTT CTAACCGGAA AGCAGGACGA TAAACTGGCT
GTTCTTGGCG GTAAGCCGCT CCGTACCAAA GCCTGGCAAA AATGGCCCAT CTGGAATCCG
GAAACCGATG AAAAACGCGT TGTTGATACC ATCAGGAGCG GCGTTTGGTC GCGCGCCGGG
GTAGCCAATG AATTTGAAGC GGCATGGGCC AAAGCGCTGG ATGTTAAACG CAGTTTAACT
GTAGCTAATG GTACAAATGC GCTAATTGTT GCACTTCACC AGATGAATAT TGGTGCAGGA
GATGAGGTAT TGGTACCACC CTATACTTTT ATTGCTACGG TTTCTGCGGT ACTGCTAAAC
GGTGCCATCC CTGTTTTTGT GGATGTGGAC CTCGAAACTT TCCAGATGGA CCCGGATAAG
ATAGAAGCAA AAATTACTCC GCGTACCAAA GCGATACTAC CTGTACACAT TTTAGGCTTG
CCATGTGATA TGGACCGAAT TATGGCGATT GCCAAAAAAC ACAATCTTTT GGTACTTGAA
GATGCCTGCC AGGCGCACTT GGCAGAGTAC GATCATAAAA AAGTAGGTAC CATAGGCCAT
GCCGGTTGCT TTAGTTTCCA AAACTCTAAA AACCTGCCCA TTGGCGAGGG AGGCGCAATT
GTGAGCAACG ACGAAAAATT TATCGACAAA TGTTTTTCTT ATACCAATTA TGGCTATCCA
TATGGAACAG CTGTAGGTAC AGTAAGCGGC GGGAGCGCTA TGCTGGGTAC TAAAGTCCGA
ACTTCTGAAT ACGCATCGGC CATCGGGCTG TCGCTACTGA AATACCTGGA CGCACAAACC
ACCACCAGGA ATGAAAATGC AGCTTACCTG AAAGCACAGA TTGCCAAAAC CCCGGGTATT
GTACCTTATA AACTATATGA TAAAGTGACC AGGGCAGCCT ATCACCTTTT TCCTTTCAGG
TTCCAGAAAC AGAACTTTAA AGGCCTGTCG AGAGATAAAT TTTTGAAAGC GTTAAGGGCA
GAGGGCATCC CATGCTCCAG CGGATATACC CCTTTGCTGG AAATGAACTT TATAAAAGAT
GCTTTTGAAT CGAAGAATTT TAAACGCATG TATACAAAAG GAGAGTTGGA TTACAACAAG
TACCTGAAAA ACAACAAATG CCCGAATAAT GACATCCTGT GTCATGAAGA GGCTGTATGG
TTTTCGCAGA GTATGCTTTT AGGCAGCAAA TCTGATATGG ATGACATTGC TGCAGCGATT
GCAAAAATTT ACAAAAATGC GGATGAACTT AACAAAATGG GCTAA
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| Protein sequence | MTMLMKPNTN NQNNETRRKF IKSTGIFAAG LALVPSFSMA SAKDKGVWSF LTGKQDDKLA
VLGGKPLRTK AWQKWPIWNP ETDEKRVVDT IRSGVWSRAG VANEFEAAWA KALDVKRSLT
VANGTNALIV ALHQMNIGAG DEVLVPPYTF IATVSAVLLN GAIPVFVDVD LETFQMDPDK
IEAKITPRTK AILPVHILGL PCDMDRIMAI AKKHNLLVLE DACQAHLAEY DHKKVGTIGH
AGCFSFQNSK NLPIGEGGAI VSNDEKFIDK CFSYTNYGYP YGTAVGTVSG GSAMLGTKVR
TSEYASAIGL SLLKYLDAQT TTRNENAAYL KAQIAKTPGI VPYKLYDKVT RAAYHLFPFR
FQKQNFKGLS RDKFLKALRA EGIPCSSGYT PLLEMNFIKD AFESKNFKRM YTKGELDYNK
YLKNNKCPNN DILCHEEAVW FSQSMLLGSK SDMDDIAAAI AKIYKNADEL NKMG
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