| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0326 |
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| Symbol | |
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| ID | 8251411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 374935 |
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| End bp | 375513 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644933974 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003090612 |
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| Protein GI | 255530240 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAGAT CTACCTATGC TGATTTAAGT GACAGGCAAT TGCTTGATTT ATTACAGGAA
GGTAATGAAC GGGCCCTGTC TGAAATATAT GAGCGCTACT GGTCTAAATT ATATTTACAG
GCTTACAATG TCATCCGGGA CCGGCAGGTT TCAGAAGATA TTGTCCAGGA AGTAATTGTA
CAGCTATGGG TAAAGCGTTC GGTAAACCAA ATCGATTGTT TAAAGGCTTA CCTGTACACT
TGTGTCAAAT ATCAGGTCTT TAAAGCATTA CCGCTGGTAA AACACAGACC TGTAATCTAT
CCTGATCACT TTTCTTTTGT GAACGACACA GATAGCCCGC TGATTACCAA AGATATTCAG
CGATTATTGG ACGAAGCAAT AGCAAACTTA CCTTTAAAAT GCCGTAACGT ATTTAACCTG
AGCAGAAAGG ACCACCTTTC TACCAAGGAA GTGGCCATGC GTTTGGGGAT TACCCCAAAA
ACAGTTGAAA ACCAGCTGAC AATTGCATTA AGGCGCATCA GGTTTGCATT AGATAAAGTG
CTGTTACTTG CCCTGGTAAT TGGTAGCATC AGGCTGTAA
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| Protein sequence | MTRSTYADLS DRQLLDLLQE GNERALSEIY ERYWSKLYLQ AYNVIRDRQV SEDIVQEVIV
QLWVKRSVNQ IDCLKAYLYT CVKYQVFKAL PLVKHRPVIY PDHFSFVNDT DSPLITKDIQ
RLLDEAIANL PLKCRNVFNL SRKDHLSTKE VAMRLGITPK TVENQLTIAL RRIRFALDKV
LLLALVIGSI RL
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