| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0295 |
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| Symbol | |
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| ID | 8251380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 345502 |
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| End bp | 347391 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644933944 |
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| Product | Cytochrome-c oxidase |
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| Protein accession | YP_003090582 |
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| Protein GI | 255530210 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00055862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00186796 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAACTA TATCATTACA CGATACACAT AACCACGATA ACCATGATGA TCATGGGCAT
CACAAAGAGA CCTTCTTAAC GAAGTATGTC TTTAGTCAGG ATCATAAAAT GATTGCCAAG
CAGTTCCTGA TAACGGGTAT TATTATGGCT GTTATTGCGA TGGGCCTTTC GATTCTGTTC
CGTTTGCAAC TGGCCTGGCC TGATAAAGAC TTCCCTATTC TGGAGACTTT CTTAGGAAAA
TGGGCTGAGG GTGGACGTAT TAAACCCGAC TTTTATCTTG CATTGGTTAC CATACATGGT
ACCATTATGG TATTCTTTGT ACTGACAGCA GGATTAAGTG GTACTTTCAG TAATTTATTA
ATTCCGCTTC AGATTGGTGC AAGGGATATG GCCTCGCCCT TCCTGAACAT GCTTTCTTAC
TGGTTCTTCT TCATGGCCTG TGTGATCATG ATGAGTTCAT TCTTTATACA AACCGGACCA
GCGAGTGCCG GATGGACAGT TTATCCGCCA TTATCTGCCT TGCCAACTGC GATTAGCGGC
TCAGGTTTAG GGATGACACT CTGGTTGATC AGTATGGTGC TTTTTGTGGC TTCATCTTTA
ATGGGTGGTA TCAATTATGT AAGTACGATA TTGAACATGC GTACCAAGGG GATGGACCTT
TGGAAAATGC CTCTGACGAT CTGGGCATTC TTCCTGACAG CTGTGCTGGG TATTTTATCT
TTCCCTGTAT TGGTTGCGGG TGTGGTTTTA TTGATCTTCG ACAGGAGTTT CGGTACCAGT
TTCTACCTTT CTGATATCGT TATGGGTACG CAGATCCTTC CCAATGAAGG GGGATCACCA
ATTTTATGGC AGCATTTGTT CTGGTTCCTG GGGCACCCTG AGGTATACAT CGTAATTATG
CCGGCCATGG GATTGTCTTC AGAGATCATG TCTGTAAATG CAAGAAAACC AATTTTTGGT
TACCATGCGA TGATCTATTC CCTGATCGGT ATTACCATCT TATCATTTAT CGTATGGGGA
CACCATATGT TTGTAACGGG AATGAATCCG CTGCTTGGTG GTGTATTTAT GATCACTACA
CTGATCATTG CAGTGCCGTC GGCAGTGAAG ACCTTTAACT GGCTGGCCAC CTTATGGAGG
GGTAACATCA GGTTTACACC TGCCATGTTG TTTGCCATTG GTATGGTTTC TTTCTTTATT
TCAGGTGGTT TAACAGGTAT TTTCCTGGGT AATGCTTCCC TGGATATCAA CCTTCACGAT
ACTTATTTTG TTGTGGCCCA CTTCCACCTG GTAATGGGAT CAGCAGCTAT CTTTGGTATG
CTTGCGGGTG TGTATCATTA TTTCCCTAAG ATGTTTGGAA GGATGATGAG CAAAAAATTA
GGTTATCTGC ATTTCTGGAT TACTTTTGCC TGTGCTTACC TGGTATTCTT CCCATTGCAC
TTTTTAGGAT TGGATGGGGT TCCGCGTCGT TATTATGCAT TTACTGAGTT TGAATTTATG
CACAAATGGG TTACAGTGAA CATTTTGGTG ACCTGGTCGG CCATTATCGC TGCACTGGCT
CAGGTAGCTT TCTTATTTAA CTTCTTCTAT TCTATCTTTA AAGGTAAAGT AGCTACCCAG
AATCCTTGGG GAGCAAATAC TTTAGAGTGG ACTACCCCGG TGGAGCGTCT GCATGGTAAC
TGGCCAGGAG AGATCCCAAC AGTTTACCGC TGGCCTTACG ATTATAGCAA GCCAGGAGCG
GAGGAAGACT TTATTCCTCA AACTGTTCCT TTCTCGCAAA CAATGAACTC AAATATGCCG
CATGATTTTG AAGGCAACAG CGAGTCGGAA CGCATACAAA GGGAATGGGA AGCAAAGAAC
ACTCCTGAAG ATGCGCCAAA ATTAGATTAA
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| Protein sequence | MSTISLHDTH NHDNHDDHGH HKETFLTKYV FSQDHKMIAK QFLITGIIMA VIAMGLSILF
RLQLAWPDKD FPILETFLGK WAEGGRIKPD FYLALVTIHG TIMVFFVLTA GLSGTFSNLL
IPLQIGARDM ASPFLNMLSY WFFFMACVIM MSSFFIQTGP ASAGWTVYPP LSALPTAISG
SGLGMTLWLI SMVLFVASSL MGGINYVSTI LNMRTKGMDL WKMPLTIWAF FLTAVLGILS
FPVLVAGVVL LIFDRSFGTS FYLSDIVMGT QILPNEGGSP ILWQHLFWFL GHPEVYIVIM
PAMGLSSEIM SVNARKPIFG YHAMIYSLIG ITILSFIVWG HHMFVTGMNP LLGGVFMITT
LIIAVPSAVK TFNWLATLWR GNIRFTPAML FAIGMVSFFI SGGLTGIFLG NASLDINLHD
TYFVVAHFHL VMGSAAIFGM LAGVYHYFPK MFGRMMSKKL GYLHFWITFA CAYLVFFPLH
FLGLDGVPRR YYAFTEFEFM HKWVTVNILV TWSAIIAALA QVAFLFNFFY SIFKGKVATQ
NPWGANTLEW TTPVERLHGN WPGEIPTVYR WPYDYSKPGA EEDFIPQTVP FSQTMNSNMP
HDFEGNSESE RIQREWEAKN TPEDAPKLD
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