| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0253 |
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| Symbol | |
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| ID | 8251338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 295823 |
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| End bp | 296431 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644933903 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003090541 |
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| Protein GI | 255530169 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.83737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGGG AGTATGCGCG TCTTAATGAA GAAGATCAAA AGCTGGTTAA CGCAATTGTG
CAGCGCGATA AAAAGCTGTT TGAAGTGCTC TATAAAAAAT ATTATCAGCA GTTATTTGCT
GTGGCCTACC GCTATGTAGG CCAGGCAGAA ATTGCAGAAG AGATTGTTCA TGATGTGTTT
ATAACTATAT GGAATAAAGC AGATCAGTTA AATATTCAAC ATTCAATGAA AAGTTATTTG
TTTAAATCGA TCGTAAATTC ATCCCTGAAC TTTATTAAAA AAGAGAAGGT CCAGGCAGAA
AAACAGCAGG TATATATGGC CATAGTAGAT AAAGAAACTG CTGATGAACC GGATACGGAT
AGGGAGGAAG CACTGCTTAA AGACCTTGCA CAGGCACTGG AACTGCTGCC CGATAAATGC
AGACAAGTGA TGTACCTGAG CCGTTTCGGG AAACTGAAAC AACAGGAGAT TGCCACACAG
ATGAACATCT CCATTAAAAC AGTGAAAAAT CACCTCACTT ACGGTTTTCA AAAGTTAAGG
GAACAGCTTG AGAAACGAAA ACATATTGCA ATTGTGCTGT TCCTGCTTTT AAACATTTTA
ACGCCTTAA
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| Protein sequence | MEREYARLNE EDQKLVNAIV QRDKKLFEVL YKKYYQQLFA VAYRYVGQAE IAEEIVHDVF
ITIWNKADQL NIQHSMKSYL FKSIVNSSLN FIKKEKVQAE KQQVYMAIVD KETADEPDTD
REEALLKDLA QALELLPDKC RQVMYLSRFG KLKQQEIATQ MNISIKTVKN HLTYGFQKLR
EQLEKRKHIA IVLFLLLNIL TP
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