Gene Phep_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0196 
Symbol 
ID8251281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp226725 
End bp227912 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content46% 
IMG OID644933846 
Productputative RNA methylase 
Protein accessionYP_003090484 
Protein GI255530112 
COG category[L] Replication, recombination and repair 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.289998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTTT TCCACACAAA AAGCAAGGTT ATCATTACCT GTAACAAAAG GCTCTCGCCT 
TATCTTCTGG ATGAGGTTAA GGCCCTTGGC TATACCATTG TCAGGGATTT TCCAACTGGC
CTGGAATTGA ACATTACCCT TACCGAATGC ATTAAGCTCA ATTTAAACCT GAGGTGTGCC
AGCCAGATTT TGTATAGCTT AAACAGCTTT AAAGCCAATA ACCCGGAAGA GCTGTACCGT
GAGCTGCTGG ATATGCCATG GGAAGAACTG ATTGATTTTT CGGGTTATTT TTCAGTAACC
TCCAATGTGG ATAACCCCAC CATCACTACC CCGCTTTTTG CAAACTTAAA AGTGAAGGAT
GCGATTGTTG ACCGCATTAA AGAAAAAAAA GGCATCCGCC CCAATTCGGG CTCTGATGCC
AATAAAACAG TGGTCCATTT GTACTGGAAA GACAGTGAGG CCGATATATT TCTGGATACC
TCGGGCGAGA CCTTAGCCAA ACATGGCTAC CGAAAAATCC CTGGTAAGGC CCCCATGCTG
GAAGCGCTTG CCGCAGCCGT AGTGCTGAGT ACCAGGTGGG ACCAGAAATC ACCTTTCGTA
AATCCAATGT GCGGTTCCGG AACCCTTGCC ATTGAGGCCG CTTTAATTGC GACCAACCGC
CGGCCCGGCC TGTTCCGCAT GAACTATGGC TTTATGCACA TTATAGGCTA TGATGAACAG
GTATTTTTTG CAGAGCGGAG AATTTTAAAG GACCAGGTAA TTAAAAATAC GGACCTGCAG
ATCATTGCTA CAGATTTATC GGATGATGCA GTCGACATCA GCCGTAAAAA TGCCAAAACA
GCTGGTGTAG ATACACTGAT CACTTTTGAA GTCTGCGATT TTGCCGAAAC ACCGGTACCC
GAAGGTGGAA AAGGCGTAGT CGTATTTAAC CCCGAATACG GTGAACGTTT AGGCGTGCAT
TCCAAGCTGG AAGCTACCTA TAAACGCATG GGCGATTTTA TGAAGCAGCA TTGCAAGGGG
TATTCTGGCT ATATTTTTAC CGGCAACCCT GATCTGGCTA AAAAGATAGG CTTAAAGGCC
GACCGTAAAG TAGAGTTTTA TAATGGAAAG CTGGATTGCC GTATGCTGGA GTACGAACTG
TACGACGGTA GCCGCAGACC TGAAGAGGAG CGTCCGGTTA AAGCTTAA
 
Protein sequence
MQVFHTKSKV IITCNKRLSP YLLDEVKALG YTIVRDFPTG LELNITLTEC IKLNLNLRCA 
SQILYSLNSF KANNPEELYR ELLDMPWEEL IDFSGYFSVT SNVDNPTITT PLFANLKVKD
AIVDRIKEKK GIRPNSGSDA NKTVVHLYWK DSEADIFLDT SGETLAKHGY RKIPGKAPML
EALAAAVVLS TRWDQKSPFV NPMCGSGTLA IEAALIATNR RPGLFRMNYG FMHIIGYDEQ
VFFAERRILK DQVIKNTDLQ IIATDLSDDA VDISRKNAKT AGVDTLITFE VCDFAETPVP
EGGKGVVVFN PEYGERLGVH SKLEATYKRM GDFMKQHCKG YSGYIFTGNP DLAKKIGLKA
DRKVEFYNGK LDCRMLEYEL YDGSRRPEEE RPVKA