Gene Phep_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0186 
Symbol 
ID8251271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp216519 
End bp217277 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content47% 
IMG OID644933836 
Producthypothetical protein 
Protein accessionYP_003090474 
Protein GI255530102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.46142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA AGTTTCTTTA CCTGGCTTTA ACGGCAGGGT TAACATTTCC TGTCCTGCAA 
GCCCAGAGCC AGATTAAAAT AGGCAATATT TTAAAACAGG TAACTGGAAA AGGCAGTGGT
ACAACCGCTA CAACGGGCAC ACCCAGCGCA CTGGAAATTG GGATGGGCAT TAAAGAAGCA
CTGGAAATAG GTACCTCCAG GGGGGCCGAC CTCCTTTCGG CAAAAGACGG CTTTCTGGGC
AATATGGCGG TAAAGATCCT CTTTCCGCCG GAAGCCCAGA AAGTTGAAAA AACGCTGCGC
AGCATAGGCA TGGGTAAACT GGCCGACAAT GTGATCGTAA GCTTAAACCG TGCAGCCGAA
AGCGCCGCCA AAGAAGCTAA ACCCATCTTT ATTTCGGCCA TTAAACAAAT GACCATTACC
GATGCCACCA ATATATTGCT GGGCAGTAAA GATGCCGCAA CCAATTATTT TAAAAGGGTA
ACCACGGCTC AGCTGATGGA GAAGTTTAAA CCGGTGATCA CCACCAGTCT GGCCAATGTA
GGGGCTACCA AATATTGGGG CCAGGCCGCC GGCCAATACA ATAAAATACC CCTGATGAAG
CCGGTGAATA CAGACCTTTC GGAATATGTT GCCCAAAAAG CAATTGATGG TATGTTTATA
CAGGTGGCCC AGGAAGAGCT TAAAATAAGG GATAATCTGG GTGCAAGGTC ATCTTCCTTG
CTTCAGAAAG TGTTTGGTTA CGCGGATAAG AATAAATAG
 
Protein sequence
MKKKFLYLAL TAGLTFPVLQ AQSQIKIGNI LKQVTGKGSG TTATTGTPSA LEIGMGIKEA 
LEIGTSRGAD LLSAKDGFLG NMAVKILFPP EAQKVEKTLR SIGMGKLADN VIVSLNRAAE
SAAKEAKPIF ISAIKQMTIT DATNILLGSK DAATNYFKRV TTAQLMEKFK PVITTSLANV
GATKYWGQAA GQYNKIPLMK PVNTDLSEYV AQKAIDGMFI QVAQEELKIR DNLGARSSSL
LQKVFGYADK NK