Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0169 |
Symbol | |
ID | 8251254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 197694 |
End bp | 198803 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644933819 |
Product | CapA family protein |
Protein accession | YP_003090457 |
Protein GI | 255530085 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2843] Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTC AAGTCATACC CCTGCTACTG CTAACCGCTA CCATCGCCCT GCTCAGCTTA AGCTGCGCAA GCAATACCAC AAGTGCTCCG CTTCATCAGG TTGCTATTGA CACCCCTTTG ATCCCGAAGA AAGATACCAT ATCAATTGTT GCTGTTGGCG ATATCATGAT TGGATCTGCA TATCCCGATA AATCCGGATT ACCCCCTGAT GATGCAAAAA CCAGCTTTAA AGCTGTAGAC AGCCTGTTGC AAGGTGATAT CATTTTTGGC AATCTGGAGG GCTGCCTGCT TGACAATGGT AAATCCACCA AATGCAAAGA TCCGAACAGC AACAGCTGTT TTGCCTTCAG AATGCCAGAA CGCTATGCTG GCATCATTAA AAATGCAGGA TTTAACCTTT TAAGCATAGC AAACAACCAT GTTGGGGATT TTGGTCTAAA GGGCAGGACA CGTACCACTG CAATTTTAGA TTCGCTGAAC ATCCATTATG CCGGCCTTCA GTCCCATCCT TCAAGCCTGT TTGAAAAAGA CAGTGTAAAA TATGCTTTTT GTGCCTTTGC GCCAAATGAA AACACAGTCT CTATTAACCA AACCGATAGC GCCAAACAAT TGGTTGCCAG GTTAAAAGAG CAGGCTGATA TTGTTATTGT TTCCTTTCAT GGTGGCGCAG AGGGAGCCAG ATTTGAACAT GTACCCAAAA AAAAGGAGAT ATTTTATGGC GAGAACAGGG CTGACGTTTA TGCTTTTGCA CACGCTGTAA TCGATGCCGG TGCAGATGTG GTGTTGGGCC ATGGGCCTCA TGTAACCCGT GCCGTTGAAG TTTACAAGAA CAAATTTATT GCCTATAGCT TAGGCAACTT TTGTACTTAT GGTATGTTTA GCCTTAAAGG GCCCAATGGC ATGGCGCCGC TGTTACAACT TAAAATAAAT GCGAATGGTG ATTTTCTGTA TGCAGATATT GTTTCGGTAA AACAGGACAA AATAAACCGT TTAACATTAG ACCCTGCTCA GGGTGCTTTC AAAAAGATCA GATTCTTAAC AAATACCGAC TTTCCTGATC ACAGTTTACT TTTTTCCGGA TCAGGACATA TCGGATTGAA GAAAAACTAG
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Protein sequence | MKFQVIPLLL LTATIALLSL SCASNTTSAP LHQVAIDTPL IPKKDTISIV AVGDIMIGSA YPDKSGLPPD DAKTSFKAVD SLLQGDIIFG NLEGCLLDNG KSTKCKDPNS NSCFAFRMPE RYAGIIKNAG FNLLSIANNH VGDFGLKGRT RTTAILDSLN IHYAGLQSHP SSLFEKDSVK YAFCAFAPNE NTVSINQTDS AKQLVARLKE QADIVIVSFH GGAEGARFEH VPKKKEIFYG ENRADVYAFA HAVIDAGADV VLGHGPHVTR AVEVYKNKFI AYSLGNFCTY GMFSLKGPNG MAPLLQLKIN ANGDFLYADI VSVKQDKINR LTLDPAQGAF KKIRFLTNTD FPDHSLLFSG SGHIGLKKN
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