| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0067 |
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| Symbol | |
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| ID | 8251151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 72249 |
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| End bp | 73589 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644933716 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_003090355 |
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| Protein GI | 255529983 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAA ATTTACAGGA CAAGCTAGAC CGTGCGTTTA AAGTTTTAAA AGGACAAGGC
AGCATTACCG AGATCAACGT GGCTGAAACC ATGAAAGAGA TCCGTAAGGC TTTATTAGAC
GCCGACGTAA ATTACAAAAC GGCCAAGAGC TTTACCGATG AGGTAAAAGA AAAAGCTTTG
GGCGCCAATG TACTTACGGC TGTTTCGCCG GGCCAGTTGC TGACCAAGAT CATGAACGAT
GAGCTTGCAG CCTTAATGGG TGGTGAGGTA ACGGAGCTTG ATTTAAAAAC AAATCCAACC
ATTATATTAA TTGCCGGTTT AAACGGTGCG GGTAAAACCA CTTTTACCGG TAAGCTGGCC
AACTTCCTGA AAAACAAAGG CAAGAAACCT TTACTGGTAG CAGGCGACGT ATACCGGCCT
GCAGCGGTAG ACCAGCTGCA GATCCTTGGC GAGCAGATCG GTGTTCCGGT GTATGCCAAC
ACGGCCTCTA AAGATCCCGT TGGGATTGCC CTGGAAGGGA TTGCAGAGGG TAAAAAACAG
CAAAACAATG TCATCATTAT AGATACTGCA GGTCGTTTAG CAATAGATGA GCAGATGATG
GATGAGATTG CCGCTGTAAA AGAAAGTACC AAACCGCATG AGATCCTCTT TGTTGTAGAT
GCCATGACCG GACAGGATGC CGTAAATACA GCCAAAGCAT TTAACGACAG GCTCGATTTT
ACAGGGGTGG TACTGACCAA ATTAGATGGT GATACCCGTG GTGGTGCGGC CCTTTCCATT
AAATCTGTAG TGAACAAGCC GATCAAATTT ATCGGTACAG GCGAAAAAAT GGAAGCCCTT
GATGTGTTCT ATCCGGAAAG GATGGCCTCA CGTATTTTAG GCATGGGTGA CGTGGTTTCC
CTTGTTGAGC GTGCCCAGCA GCAGTTTGAC GAGAAAGAAG CCGCAGAACT GCAGAAAAAG
ATCCGTAAGA ACAAATTTGA CTTCAACGAC TTTTACAACC AGATCCAGCA GATCAAAAAA
ATGGGTAACA TGAAAGACCT GATGGGCATG ATACCTGGTG TAGGGAAGAT GATGAAAAAT
GTGGACATTG AAGATGATGC CTTTAAAAAT GTAGAGGCCA TTATCCAGTC GATGACCAAA
TACGAGCGTG AAAACCCCGA TAGTATCCAG CAAAGCAGAC GTCTGCGCAT TGCCAAAGGA
TCGGGCAATA AAATAGAGGA AGTGACCAAG CTGATCAAAC AGTTTGAGGA CATGCGTAAA
GTGATGAAGC AGTTCTCTAA TCCCGCTGCC GCAGCAAGGA TGATGAAAAA CATGCCTAAA
ATGCCTCAGG GCAGAATGTA G
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| Protein sequence | MFENLQDKLD RAFKVLKGQG SITEINVAET MKEIRKALLD ADVNYKTAKS FTDEVKEKAL
GANVLTAVSP GQLLTKIMND ELAALMGGEV TELDLKTNPT IILIAGLNGA GKTTFTGKLA
NFLKNKGKKP LLVAGDVYRP AAVDQLQILG EQIGVPVYAN TASKDPVGIA LEGIAEGKKQ
QNNVIIIDTA GRLAIDEQMM DEIAAVKEST KPHEILFVVD AMTGQDAVNT AKAFNDRLDF
TGVVLTKLDG DTRGGAALSI KSVVNKPIKF IGTGEKMEAL DVFYPERMAS RILGMGDVVS
LVERAQQQFD EKEAAELQKK IRKNKFDFND FYNQIQQIKK MGNMKDLMGM IPGVGKMMKN
VDIEDDAFKN VEAIIQSMTK YERENPDSIQ QSRRLRIAKG SGNKIEEVTK LIKQFEDMRK
VMKQFSNPAA AARMMKNMPK MPQGRM
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