Gene Phep_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0031 
Symbol 
ID8251115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp35981 
End bp36355 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content38% 
IMG OID644933680 
Productiojap-like protein 
Protein accessionYP_003090319 
Protein GI255529947 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.983708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.170479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAA AGAAAATTGG AAACCTTTCT ACATACCTCT CAGAGATCGC TGTACACGGC 
ATCCAGGAAA AAAAAGGAAA CGACATCGTA AGATTGGACT TAAGAGCGCT CAATAGTTCT
GTTTCTGATT ACTTTATCAT CTGCAATGCA GATTCCGCAA CACAAGTTAA AGCAATTGCC
GATAGTGTAG AGGAAGAAAT CTATAAAAAA ACTCAAACTA ATCCATGGAG AAAAGAAGGA
CTGGAACATG CCGACTGGAT CATTCTTGAT TATTTTGATA TCGTAGTTCA CATATTTAAA
ACTGAAAAGC GCGAATTTTA TGGAATTGAA GACCTTTGGG GCGATGCCCA GTCTACTTCC
TATCAAAGTG CTTAA
 
Protein sequence
MVKKKIGNLS TYLSEIAVHG IQEKKGNDIV RLDLRALNSS VSDYFIICNA DSATQVKAIA 
DSVEEEIYKK TQTNPWRKEG LEHADWIILD YFDIVVHIFK TEKREFYGIE DLWGDAQSTS
YQSA