Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5732 |
Symbol | |
ID | 3714227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6425206 |
End bp | 6426750 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_351456 |
Protein GI | 77461949 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00344772 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.460053 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAC TCAATCCTTC CGAAATAAGT GAAATTATCA AGGGCCGCAT CGAAAAGCTC GATGTGACCT CCCAAGCCCG TAACGAAGGC ACTGTCGTCA GCGTATCTGA CGGTATCGTG CGGATTCACG GTCTGGCCGA CGTCATGTAC GGCGAGATGA TCGAGTTTCC GGGCGGCGTC TACGGTATGG CCCTCAACCT GGAGCAAGAC TCCGTAGGTG CCGTTGTACT GGGCGCATAC ACGACTCTGG CTGAAGGCAT GAGCGCCAAG TGCACCGGCC GCATCCTCGA AGTTCCGGTT GGTAAGGAAC TGCTGGGTCG CGTTGTCGAC GCACTGGGTA ACCCTGTTGA CGGCAAAGGT CCACTGGGCA ACACCGAGAC CGACGCGGTC GAGAAAGTTG CTCCGGGCGT GATCTGGCGT AAGTCGGTAG ACCAGCCTGT ACAGACTGGC TACAAGGCTG TCGATGCCAT GATCCCTGTC GGCCGTGGCC AGCGTGAGCT GATCATCGGT GACCGTCAGA TCGGTAAAAC CGCTCTGGCG ATCGACGCGA TCATCAACCA GAAAGACAGC GGCATTTTCT GCGTCTACGT GGCAATCGGT CAGAAGCAAT CGACCATCGC CAACGTGGTT CGCAAGCTGG AAGAAAACGG TGCACTGGCT AACACCATCA TCGTTGCAGC GAGCGCTTCG GAATCTGCAG CACTGCAATT CCTGGCTCCG TACTCCGGTT GCACCATGGG TGAATTCTTC CGCGACCGCG GTGAAGACGC GCTGATCGTT TATGACGATC TGTCCAAGCA AGCAGTGGCT TACCGCCAGA TTTCCCTGCT GCTGCGCCGT CCACCAGGCC GTGAAGCTTA CCCAGGCGAC GTGTTCTATC TCCACTCCCG TCTACTGGAG CGCGCATCCC GCGTTTCGGA AGAGTACGTA GAGAAGTTCA CCAACGGCGC AGTGACCGGC AAAACCGGTT CCCTGACCGC ACTGCCGATC ATCGAAACCC AGGCTGGCGA CGTTTCCGCG TTCGTTCCGA CCAACGTGAT TTCCATCACC GACGGTCAGA TCTTCCTGGA ATCGGCCATG TTCAACTCGG GCATCCGCCC TGCAGTGAAC GCCGGTGTTT CGGTATCCCG TGTGGGTGGT GCCGCTCAGA CCAAGATCAT CAAGAAGCTG TCCGGTGGTA TCCGTACCGC TCTGGCTCAG TACCGTGAAC TGGCGGCATT CGCCCAGTTC GCTTCTGACC TGGACGAAGC GACCCGCAAG CAACTTGAGC ATGGTCAGCG CGTTACCGAG CTGATGAAGC AGAAGCAATA CGCGCCAATG TCGATCGCCG ACATGTCGCT GTCGCTGTAT GCCGCTGAGC GTGGGTTCCT GACCGACATC GAAATCACCA AGATCGGCAG CTTCGAACAA GCGCTGATCG CTTTCTTCAA CCGCGATCAC GCCGATTTGA TGGCCAAGAT CAACGTTAAA GGTGACTTCA ATGACGAAAT CGACGCTGGC CTGAAGGCTG GTATCGAGAA GTTCAAGGCC ACCCAAACCT GGTAA
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Protein sequence | MQQLNPSEIS EIIKGRIEKL DVTSQARNEG TVVSVSDGIV RIHGLADVMY GEMIEFPGGV YGMALNLEQD SVGAVVLGAY TTLAEGMSAK CTGRILEVPV GKELLGRVVD ALGNPVDGKG PLGNTETDAV EKVAPGVIWR KSVDQPVQTG YKAVDAMIPV GRGQRELIIG DRQIGKTALA IDAIINQKDS GIFCVYVAIG QKQSTIANVV RKLEENGALA NTIIVAASAS ESAALQFLAP YSGCTMGEFF RDRGEDALIV YDDLSKQAVA YRQISLLLRR PPGREAYPGD VFYLHSRLLE RASRVSEEYV EKFTNGAVTG KTGSLTALPI IETQAGDVSA FVPTNVISIT DGQIFLESAM FNSGIRPAVN AGVSVSRVGG AAQTKIIKKL SGGIRTALAQ YRELAAFAQF ASDLDEATRK QLEHGQRVTE LMKQKQYAPM SIADMSLSLY AAERGFLTDI EITKIGSFEQ ALIAFFNRDH ADLMAKINVK GDFNDEIDAG LKAGIEKFKA TQTW
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