Gene Pfl01_5707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5707 
Symbol 
ID3713912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6396156 
End bp6397367 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content61% 
IMG OID 
Productcytochrome c biogenesis protein, transmembrane region 
Protein accessionYP_351434 
Protein GI77461927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.911728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.326453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCTCA TCGCTTTCCT GGGCGGTCTG TTGACTGTCC TCAGTCCGTG CATTCTGCCG 
GTAGTGCCGT TCCTGTTCGC CGGTGCCGAC CGTACCCGTT CCTCCATTTT GCTGACCCTT
GGCGGTATGG CCCTGACCTT CGCCCTGATC TCCAGTCTGG CGGTGGTCAG TAGCGAGTGG
GTGATCCAGG CCAGCAACAC CGGTCGTCAC ATTGCGCTGG CGGTGATGGT GCTGTTTGCG
CTGTCGCTGA TTTCCGCCCG TATCGGTGAC TGGCTGGCCC GGCCCTTCGT GCTGCTGGGC
AATCGCCTCG ACCCGGACAG CCGGAAAAAG ACCGGCCCGA TGGCGTCGAT CATGATCGGT
GTCGCCACCG GTCTGCTGTG GGCGCCGTGC GCCGGCCCGA TTCTCGGCGT GATCCTCACC
GGTGCCATGC TGCAAGGCGC CAACGCCCAG ACCAGCCTGT TGCTGCTGGC TTACGGTGCG
GGCAGTGCGC TGTCGCTGGG GACGTTGATC TTCGCCGGTC GCGGCCTGGT CAACCGACTG
AAACCGTCGA TTCCTTTCAC TGGCTGGTTC CGCCGCGGCG CGGGTGTTGC GGTGCTGGCG
ACGGCGGCGG TGATCGCCAC CGGTGCTGAC AACGTGCTGC TGGCCAACAC CTCGTCACAA
GGCGTGGCAT CGGTCGAGAA AAGCGTGCTG GAGAACGTGC CGAAAGTGGT GGACTACTTC
GTCAGCAAAG TGCGTGCGGA CTCGATCGAA GACGAGGCCG GCAAAGGCAC GATGCCGTCG
CTGTCTGGCG CGGTGCAGTG GCTGAACTCA CCGGAACTGA CGGCTGAGTC CCTGCGCGGC
AAAGTGGTGC TGGTGGACTT CTGGACCTAC GACTGCATCA ACTGTCAGCA CACCCTGCCG
TACGTGAAGG AGTGGGAGAA GAAGTACGGT AAGGACGGTC TGGTGGTGAT CGGCGTGCAC
ACCCCGGAGT ACGGTTACGA GCGGATCATC GACAACGTCA AGGATCAAGT GAAGAAGCTC
GGCATCACCT ACCCGGTGGC CATCGACAAC AACTACACAA TCTGGCGCAA CTTCGATAAC
CAGTACTGGC CGGCGCATTA CTTGGTCGAC GCCAAGGGCC AGATACGTTA CACCCACTTT
GGCGAAGGTA GTTATAAGGT GCAGGAGCAG ATGATCCAGA CTCTGTTGAA CGAGGCGAAA
GCTTCGCAGT GA
 
Protein sequence
MFLIAFLGGL LTVLSPCILP VVPFLFAGAD RTRSSILLTL GGMALTFALI SSLAVVSSEW 
VIQASNTGRH IALAVMVLFA LSLISARIGD WLARPFVLLG NRLDPDSRKK TGPMASIMIG
VATGLLWAPC AGPILGVILT GAMLQGANAQ TSLLLLAYGA GSALSLGTLI FAGRGLVNRL
KPSIPFTGWF RRGAGVAVLA TAAVIATGAD NVLLANTSSQ GVASVEKSVL ENVPKVVDYF
VSKVRADSIE DEAGKGTMPS LSGAVQWLNS PELTAESLRG KVVLVDFWTY DCINCQHTLP
YVKEWEKKYG KDGLVVIGVH TPEYGYERII DNVKDQVKKL GITYPVAIDN NYTIWRNFDN
QYWPAHYLVD AKGQIRYTHF GEGSYKVQEQ MIQTLLNEAK ASQ