Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5680 |
Symbol | |
ID | 3713672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6364205 |
End bp | 6365776 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_351407 |
Protein GI | 77461900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTTG CACCGTGGGA TGCCATGAAT TTCATTCTCT ACTCGGACGT CAACGACCGC TCCATCAGCC AGAGTCTGGG GCGTCCCGAA TATAGCTACT ACTTCGTGCT CAAGGCCTAT CGCCCGGTGC TGGAAAGCCT GGGGCGGGTG CATGTGGTGT CTACCAGCGC CGAGGTTGAT CCACTCTATC GGCAACTGCT CGCCGCCGGT GAAAGCAGCG TTTTCCTGTC CTTCACGCCG CCACAAAATA CCCCGACCGA TCTTGAGTGC CCGACGATCT GCGTGATCGC ATGGGAGTTC GATTCGATCC CCGACGAGTC GTGGGACGAT GATCCGCGCC ACGACTGGAC GCAGATGCTC GCCCGACAGG GACGGGTCAT TACGCTGTCG AGCCACACCG CCCGCGCGAT TCGCCGCGCC ATGGGCGAGG ACTTTCCGGT ACTCGTGCTG CCGACGCCCT TGTGGGAAAA CTTCTCCGCC ATTCGTGAGC AGCACGTCAG TGCGCCGATC AATCCCGGCG CGACCCTGGC GATCAAGGGC TGCATTTTCG ACAGCCGCAC GCTGGGACTG TCTGCCGACG ATTTGCTGCC CAAACCGCTG ACCGCCGAAC AATTGGCTGA AATTGAGGCA CTGCGCCCGC CACCGCTGAC GGTCAAACGA CGCCTGGTGA TTGCCCGCCA CTATCTGCGT CTGTGGATGC TGGGCGCGGG TGAAGAACGG GTGAAATTCC TGCACCACTG GTACTGGGAA GGTGTGCAGG ATCTGCTGCC GGACAGCGCA CACGCCTGGC TTGAAAAGCG CTTCCCGGCC ATCGCCGCTC CGCATGCGGT AGTTGTGGTC GAGCCACCAC CGCTGGATCT GCCGGACACG TCCTCTGTGG TCGAGACCGC GGTGGAAGGC GTGATCTACG TCACCGTGTT CAACCCCAAA GACGGTCGCA AGAACTGGCA CCACCTGATC ACCGCGTTTT GCTGGGCCTT TCGCGAAACG CCTGACGCGA CGCTGGTGCT GAAGATTACC CAGAACGATC TGGCGTCCTA CTACAGCGAA CTGATGACCC TGCTCGCACA ACTTACACCG TTCGCCTGCC GGGTGCTGGT GATGCACGGT TACCTGGACG ATGCGCAATA CGCGCGGCTT TACCAGGCCG CCAGTTTTTA CGTCAACGCT TCACGCTGCG AGGGCCTGTG CCTGCCGTTG ATGGAGTTCA TGTCCAGCGG CAAACCGGTG ATCGCCCCGG ATCACACGGC CATGGAAGAC TACATCGACG ACACCGTGGC CTTCGTCGTC CGGTCCAGCG AAGAGCTGAC GATCTGGCCC CAGGACACCC GCATCATCTA CCGCACTTTG CGCTATCGGC CGGACTGGGC TTCGCTCAAA AGCGCCTATG AGAACAGCTA CCGGATGGCC AAGGCGCAGC CGCAGGAGTA CGCGCGGATG TCTGCCGCTG CTGTCGAGCG CATGCACGAC TACTGCGCGT TTGCCCCAGT GCAGCAGCGC ATGGCGGACT TTTTCGGCCT CGCGCCACTG ACCGTCGATG CCGCCCCCGT GACGGACAAT GCCTCATGCT GA
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Protein sequence | MAVAPWDAMN FILYSDVNDR SISQSLGRPE YSYYFVLKAY RPVLESLGRV HVVSTSAEVD PLYRQLLAAG ESSVFLSFTP PQNTPTDLEC PTICVIAWEF DSIPDESWDD DPRHDWTQML ARQGRVITLS SHTARAIRRA MGEDFPVLVL PTPLWENFSA IREQHVSAPI NPGATLAIKG CIFDSRTLGL SADDLLPKPL TAEQLAEIEA LRPPPLTVKR RLVIARHYLR LWMLGAGEER VKFLHHWYWE GVQDLLPDSA HAWLEKRFPA IAAPHAVVVV EPPPLDLPDT SSVVETAVEG VIYVTVFNPK DGRKNWHHLI TAFCWAFRET PDATLVLKIT QNDLASYYSE LMTLLAQLTP FACRVLVMHG YLDDAQYARL YQAASFYVNA SRCEGLCLPL MEFMSSGKPV IAPDHTAMED YIDDTVAFVV RSSEELTIWP QDTRIIYRTL RYRPDWASLK SAYENSYRMA KAQPQEYARM SAAAVERMHD YCAFAPVQQR MADFFGLAPL TVDAAPVTDN ASC
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