Gene Pfl01_5680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5680 
Symbol 
ID3713672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6364205 
End bp6365776 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351407 
Protein GI77461900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTTG CACCGTGGGA TGCCATGAAT TTCATTCTCT ACTCGGACGT CAACGACCGC 
TCCATCAGCC AGAGTCTGGG GCGTCCCGAA TATAGCTACT ACTTCGTGCT CAAGGCCTAT
CGCCCGGTGC TGGAAAGCCT GGGGCGGGTG CATGTGGTGT CTACCAGCGC CGAGGTTGAT
CCACTCTATC GGCAACTGCT CGCCGCCGGT GAAAGCAGCG TTTTCCTGTC CTTCACGCCG
CCACAAAATA CCCCGACCGA TCTTGAGTGC CCGACGATCT GCGTGATCGC ATGGGAGTTC
GATTCGATCC CCGACGAGTC GTGGGACGAT GATCCGCGCC ACGACTGGAC GCAGATGCTC
GCCCGACAGG GACGGGTCAT TACGCTGTCG AGCCACACCG CCCGCGCGAT TCGCCGCGCC
ATGGGCGAGG ACTTTCCGGT ACTCGTGCTG CCGACGCCCT TGTGGGAAAA CTTCTCCGCC
ATTCGTGAGC AGCACGTCAG TGCGCCGATC AATCCCGGCG CGACCCTGGC GATCAAGGGC
TGCATTTTCG ACAGCCGCAC GCTGGGACTG TCTGCCGACG ATTTGCTGCC CAAACCGCTG
ACCGCCGAAC AATTGGCTGA AATTGAGGCA CTGCGCCCGC CACCGCTGAC GGTCAAACGA
CGCCTGGTGA TTGCCCGCCA CTATCTGCGT CTGTGGATGC TGGGCGCGGG TGAAGAACGG
GTGAAATTCC TGCACCACTG GTACTGGGAA GGTGTGCAGG ATCTGCTGCC GGACAGCGCA
CACGCCTGGC TTGAAAAGCG CTTCCCGGCC ATCGCCGCTC CGCATGCGGT AGTTGTGGTC
GAGCCACCAC CGCTGGATCT GCCGGACACG TCCTCTGTGG TCGAGACCGC GGTGGAAGGC
GTGATCTACG TCACCGTGTT CAACCCCAAA GACGGTCGCA AGAACTGGCA CCACCTGATC
ACCGCGTTTT GCTGGGCCTT TCGCGAAACG CCTGACGCGA CGCTGGTGCT GAAGATTACC
CAGAACGATC TGGCGTCCTA CTACAGCGAA CTGATGACCC TGCTCGCACA ACTTACACCG
TTCGCCTGCC GGGTGCTGGT GATGCACGGT TACCTGGACG ATGCGCAATA CGCGCGGCTT
TACCAGGCCG CCAGTTTTTA CGTCAACGCT TCACGCTGCG AGGGCCTGTG CCTGCCGTTG
ATGGAGTTCA TGTCCAGCGG CAAACCGGTG ATCGCCCCGG ATCACACGGC CATGGAAGAC
TACATCGACG ACACCGTGGC CTTCGTCGTC CGGTCCAGCG AAGAGCTGAC GATCTGGCCC
CAGGACACCC GCATCATCTA CCGCACTTTG CGCTATCGGC CGGACTGGGC TTCGCTCAAA
AGCGCCTATG AGAACAGCTA CCGGATGGCC AAGGCGCAGC CGCAGGAGTA CGCGCGGATG
TCTGCCGCTG CTGTCGAGCG CATGCACGAC TACTGCGCGT TTGCCCCAGT GCAGCAGCGC
ATGGCGGACT TTTTCGGCCT CGCGCCACTG ACCGTCGATG CCGCCCCCGT GACGGACAAT
GCCTCATGCT GA
 
Protein sequence
MAVAPWDAMN FILYSDVNDR SISQSLGRPE YSYYFVLKAY RPVLESLGRV HVVSTSAEVD 
PLYRQLLAAG ESSVFLSFTP PQNTPTDLEC PTICVIAWEF DSIPDESWDD DPRHDWTQML
ARQGRVITLS SHTARAIRRA MGEDFPVLVL PTPLWENFSA IREQHVSAPI NPGATLAIKG
CIFDSRTLGL SADDLLPKPL TAEQLAEIEA LRPPPLTVKR RLVIARHYLR LWMLGAGEER
VKFLHHWYWE GVQDLLPDSA HAWLEKRFPA IAAPHAVVVV EPPPLDLPDT SSVVETAVEG
VIYVTVFNPK DGRKNWHHLI TAFCWAFRET PDATLVLKIT QNDLASYYSE LMTLLAQLTP
FACRVLVMHG YLDDAQYARL YQAASFYVNA SRCEGLCLPL MEFMSSGKPV IAPDHTAMED
YIDDTVAFVV RSSEELTIWP QDTRIIYRTL RYRPDWASLK SAYENSYRMA KAQPQEYARM
SAAAVERMHD YCAFAPVQQR MADFFGLAPL TVDAAPVTDN ASC