| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5671 |
|---|
| Symbol | |
|---|
| ID | 3712967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 6354015 |
|---|
| End bp | 6355415 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_351398 |
|---|
| Protein GI | 77461891 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACT ATGACGTGGT GATTCTGGGC GGTGGCCCCG GCGGTTATAA CGCAGCGATC
CGCGCCGGCC AGTTGGGCCT CAAGGCCGCG TGCGTCGAGG GCCGCGCCAC GCTGGGTGGC
ACCTGCCTGA ACGTCGGCTG CATGCCGTCC AAGGCGCTTT TGCATGCGTC AGAGCTCTAC
GAAGCGGCGC TGGGCGCGGA GTTCGCCAAC CTCGGCATCG AAGTCAAACC CACGCTCAAC
CTTGCGCAAA TGATGAAGCA GAAAGACGAA AGCGTGAGCG GCCTGACCAA AGGCATTGAA
TTCCTGTTCC GCAAAAACAA GGTCGACTGG ATCAAGGGCT GGGGCCACAT CGACGGCCCC
GGAAAAGTCA GCGTGACCGG TGATCAGGGC AGCCGCATCG AACTGACGGC CAAGGACATC
GTCATCGCCA CCGGCTCCGA ACCCACTCCC CTGCCCGGCG TGGAGATCGA CAACAAGCGC
ATCCTCGACT CGACCGGTGC GCTGTCCTTG AGCGAAGTGC CCAAGCATCT GGTGGTGATT
GGTGCGGGCG TGATCGGTCT CGAACTCGGC TCGGTCTGGC GCCGGCTCGG CGCGCAGGTA
ACGGTGGTGG AATACTTAGA CCGCATCTGC CCCGGCGTCG ACGGCGAAGC CGGCAAGACT
CTGCAACGCT CGCTGAGCAA ACAGGGCATC AGCTTCAAGC TGAGCTCGAA AGTGACCAGC
GCCACTTCAT CGGCCAACGG CGTACAACTC AGCGTGGAGC CCGCCGCTGG CGGCAGCGCG
GAAATCCTTG AAGCCGATTA CGTGCTGGTG GCCATCGGTC GTCGTCCGTA CACCCAGGGC
CTGGGCCTGG AAAACGTCGG CCTGAGCACC GACAAACGCG GCATGCTCGC CAATAAACAG
CATCGCACTG AAGCGCCTGG CGTGTGGGTG ATCGGTGACG TGACCTCCGG GCCGATGCTC
GCGCACAAGG CCGAAGACGA AGCCATGGCC TGCATCGAAC AGATCGTCGG CAAGGCCGGC
GAGGTCAATT ACGACCTGAT TCCCAACGTG ATCTACACCC GCCCCGAGCT GGCCAGCGTC
GGCAAGACCG AAGAGCAGCT GAAGGCGGAA GGCCGGGCGT ACAAGGTCGG CAAATTCCCG
TTCACCGCCA ACAGCCGGGC GAAGATCAAT CACGAGACCG AAGGCTTCGC CAAAGTCATC
GCCGATGAGC GCACCGACGA AGTCCTCGGC GTGCACCTGG TCGGCCCGAG CGTCAGCGAA
ATGATCGGCG AGTTCTGCGT GGCCATGGAG TTCAGCGCCT CGGCCGAGGA CATCGCGCTG
ACCTGTCACC CGCATCCAAC CCGCTCCGAA GCGTTGCGTC AGGCAGCGAT GAATGTCGAG
GGGATGGCGA CGCAGATGTA A
|
|---|
| Protein sequence | MSNYDVVILG GGPGGYNAAI RAGQLGLKAA CVEGRATLGG TCLNVGCMPS KALLHASELY
EAALGAEFAN LGIEVKPTLN LAQMMKQKDE SVSGLTKGIE FLFRKNKVDW IKGWGHIDGP
GKVSVTGDQG SRIELTAKDI VIATGSEPTP LPGVEIDNKR ILDSTGALSL SEVPKHLVVI
GAGVIGLELG SVWRRLGAQV TVVEYLDRIC PGVDGEAGKT LQRSLSKQGI SFKLSSKVTS
ATSSANGVQL SVEPAAGGSA EILEADYVLV AIGRRPYTQG LGLENVGLST DKRGMLANKQ
HRTEAPGVWV IGDVTSGPML AHKAEDEAMA CIEQIVGKAG EVNYDLIPNV IYTRPELASV
GKTEEQLKAE GRAYKVGKFP FTANSRAKIN HETEGFAKVI ADERTDEVLG VHLVGPSVSE
MIGEFCVAME FSASAEDIAL TCHPHPTRSE ALRQAAMNVE GMATQM
|
|---|
| |