| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5663 |
|---|
| Symbol | |
|---|
| ID | 3712959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 6343000 |
|---|
| End bp | 6344337 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_351390 |
|---|
| Protein GI | 77461883 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.359505 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGTG TGCTGATTCG CAATGCGCGG CTGGTGAACG AAGGGCGTGA GTTCGATGCC
GATCTGTTGG TCAGCCACGG ACGCATCGTC AAGATCGCCG GCAGCATCGA AGGTGAAAAC
GCGACCCGGG AAATCGACGC CACCGGCCAA TGGCTGCTGC CGGGGATGAT TGATGACCAG
GTGCATTTCC GTGAGCCGGG TGCGCCGGCC AAGGGCAGCG TCCACACCGA GTCCCGGGCA
GCCGTGGCCG GTGGCATCAC CAGTTTTATG GACATGCCCA ACACCCACCC TGCCACCCTC
ACCCTTGAAG CGCTGGCCGA CAAAAAACGC CGGGCAGCAA TCAACTCGGT GGCCAACTAC
GGTTTTCACT TTGGCGTCAG TCACGACAAT CTGGACACGG TCGCAGCACT CAACCCGAGC
GAAGTGGCCG GGGTCAAAGT GTTCATGGGC GCGTCCACCG GCAACATGCT GGTGGACGAC
CCGCACACCC TCGAGCGCCT GTTCGCTGAA GTGCCGACGA TTCTGCTGGC CCACTGTGAA
CACACGCCGA GCATCGAAGC GAATGCCGCG AACCTGCGTG AGCGGTACGG CAACCAACTG
CCACCCGATG CCCATGCGCA GATCCGCAAT GCCGACAGCT GCTTTCGCTC ATCGTCTCTG
GCAGTGGATC TGGCCAAACG TCACGGCACT CGCCTGCACG TCCTGCACCT GACCACGGCC
CGCGAACTGG CCCTGTTTGA AGATAAACCG CTGACGCAAA AACGCATCAC CGCCGAAGTC
TGCCTGCACC ATTTACTGTT CGATGAACGT GACTATCCGA ACCTCGGCAA CCTGATCAAA
TGCAACCCGG CGATCAAGTC CCGGAGCGAT CGTGACGCCC TGCGCCAGGC ACTGCTGAGC
AATCGACTGG ACGTGATCGG CAGCGATCAC GCACCGCACA CCTGGGCGGA AAAACAGCAA
GCGTATGAAC AGGCACCGTC CGGGCTGCCA CTGGTACAGC ACGCTCTGCC GGCGTTGTTG
GAACTGGTGG CGGATGGCGT GCTGCCGATC ACCACGCTGG TGGCCAAGAC CAGTCACCGG
GTGGCAGATC TGTTTGCCAT TCCGGATCGG GGTTATTTGC GTGAGGGATA TTGGGCGGAT
CTGGTGTTGA TTCAACCGGA GCCCAAAGGC GTCGCGGTGT CACGCCAGCC GGTTCTGTCG
CAATGCGGCT GGACGCCGTT CGCTCAGCGC AGCTTTCGGC ATAGGGTCAG CACGACGATA
GTGTCGGGGC AGATTGCATG GCATGACCAC CGGATTCATG ACAGTTGTCA GGGCTTGCCA
CTGCGGTTCA TGCGTTGA
|
|---|
| Protein sequence | MSSVLIRNAR LVNEGREFDA DLLVSHGRIV KIAGSIEGEN ATREIDATGQ WLLPGMIDDQ
VHFREPGAPA KGSVHTESRA AVAGGITSFM DMPNTHPATL TLEALADKKR RAAINSVANY
GFHFGVSHDN LDTVAALNPS EVAGVKVFMG ASTGNMLVDD PHTLERLFAE VPTILLAHCE
HTPSIEANAA NLRERYGNQL PPDAHAQIRN ADSCFRSSSL AVDLAKRHGT RLHVLHLTTA
RELALFEDKP LTQKRITAEV CLHHLLFDER DYPNLGNLIK CNPAIKSRSD RDALRQALLS
NRLDVIGSDH APHTWAEKQQ AYEQAPSGLP LVQHALPALL ELVADGVLPI TTLVAKTSHR
VADLFAIPDR GYLREGYWAD LVLIQPEPKG VAVSRQPVLS QCGWTPFAQR SFRHRVSTTI
VSGQIAWHDH RIHDSCQGLP LRFMR
|
|---|
| |