Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5630 |
Symbol | |
ID | 3717463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6305290 |
End bp | 6306288 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | AraC family transcriptional regulator |
Protein accession | YP_351357 |
Protein GI | 77461850 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.389433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.244863 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCACT CCCACCTCAC CACCCTCAAC GCCGTCGCCC TGGTGCTCAA CACCTTCAGG GATCAAGGCC TGTCCAGCGA AGCACTGCTC GCCGGCAGCG GCATCAGCGC GGCGGATCTA AGCCGGGCCG ACACCCGCAT TACCACCAAT CAGGAGATGC AGGTCTGCGC CAATGCGGTC GCGCTCAAGC ACGACATCGG CCTGGAGCTG GGCCGGCGCA TGCATGTTTC CTGCTACGGC ATCCTCGGTT ACGCGCTGCT GACCTGTGCC ACCTTCGGTG ACGCTTTGCG GCTGGCGATC CGTTATCCGG CGCTGCTGGG AACACTTTTC GAACTGAGCC TGGAAGACGA CGGCGAGCGC GTCTGGTTCG TCGCCGCCGA TTACCGCGAA AGCCCGGCGA TGGCCGTATT CAACGCCGAG TTCTGTCTGG TGTCGCTGAA AGTCATCTGC GACGACCTGC TCGGCCATCC GCTGCCATTG CTGGCCGCGC GCTTCGAACA CGCCGCGCCG GATTACCGCG ACAGCTACGC CGAACACTTC AAGGCGCCGC TGCACTTCGG CGCCAAGGAC AACGCCTTCG CCTTCGACCG GCGCTGGCTC GACCAGCCGC TGCCGCTGGC CGACATCATC ACCCACCAGG CCATGGCCGA GCGTTGCCGC AAACAGAACA CCGAGTTCAC CGGCCGCCAG GCATGGCTGG GTCGGATCCG CCAGTTGCTC AGCGCCCAAC TCAACGCCGC ACCGGGGCTG GAAGGCCTGG CGCAACAGAT GAACTGCTCG CCGCGCACCC TGCGCCGGCA TCTGAAGGAC ATGGGTTGCA GCTATCAGGA ATTGCTCGAC GAACTGCGTT TCGAGCGGGC CAAGCAGATG CTTTGCGAGG ATCAGTTGCC GATTTATCGC ATCGCCGAAA CCCTCGGCTT CAGCGAGACC GCAAGCTTCC GCCATGCCTT CGTGCGCTGG AGCGGTGTGG CACCGAGTCA ATTCCGGCCA CACGGTTAA
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Protein sequence | MLHSHLTTLN AVALVLNTFR DQGLSSEALL AGSGISAADL SRADTRITTN QEMQVCANAV ALKHDIGLEL GRRMHVSCYG ILGYALLTCA TFGDALRLAI RYPALLGTLF ELSLEDDGER VWFVAADYRE SPAMAVFNAE FCLVSLKVIC DDLLGHPLPL LAARFEHAAP DYRDSYAEHF KAPLHFGAKD NAFAFDRRWL DQPLPLADII THQAMAERCR KQNTEFTGRQ AWLGRIRQLL SAQLNAAPGL EGLAQQMNCS PRTLRRHLKD MGCSYQELLD ELRFERAKQM LCEDQLPIYR IAETLGFSET ASFRHAFVRW SGVAPSQFRP HG
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