Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5611 |
Symbol | |
ID | 3717687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6283699 |
End bp | 6284460 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_351339 |
Protein GI | 77461832 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.401976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.199229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGTA AAGAAGGCCT TACCCATCAC ATTTCCGCGC AGTTCAACGC CGAACTGGAA GAAGTGCGCA GCCACCTGCT GGCCATGGGC GGGCTGGTCG AGAAGCAGGT CAATGACGCG GTCACCGCGC TGATCGAGGC CGACTCGGGC CTGGCCCAGC AAGTGCGTGA GATCGACGAC CAGATCAACC AGATGGAACG CAACATCGAC GAAGAATGCC TGCGCATTCT GGCCCGTCGT CAGCCTGCGG CCTCCGACCT GCGTCTGATC ATCAGCATCT CCAAGTCGGT GATCGACCTT GAGCGCATCG GCGACGAAGC GACCAAGATC GCCCGCCGCG CGATTCAGCT GTGCGAAGAA GGCGAAGCGC CGCGCGGTTA CGTCGAAGTG CGCCACATCG GTGACCAGGT GCGCAACATG GTGCGCGATG CGCTGGACGC GTTTGCCCGC TTCGACGCCG ATCTGGCGTT GTCGGTGGCG CAGTACGACA AGATCATCGA CCGCGAATAC AAAACCGCTC TGCGCGAACT GGCGACCTAC ATGATGGAAG ACCCGCGCTC TATCTCGCGG GTCTTGAGCA TTATCTGGGT GCTGCGTTCG CTGGAGCGGA TCGGCGACCA CGCCCGCAAC ATCTCTGAGC TGGTGATCTA TCTGGTGCGC GGCACCGATG TGCGCCACAT GGGCCTCAAG CGCATGAAGG AAGAAGTTGA AGGGACAAGT GGTGAAACCG CTAATGTTCC GGGCGATGCT GACGATAAGT AA
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Protein sequence | MISKEGLTHH ISAQFNAELE EVRSHLLAMG GLVEKQVNDA VTALIEADSG LAQQVREIDD QINQMERNID EECLRILARR QPAASDLRLI ISISKSVIDL ERIGDEATKI ARRAIQLCEE GEAPRGYVEV RHIGDQVRNM VRDALDAFAR FDADLALSVA QYDKIIDREY KTALRELATY MMEDPRSISR VLSIIWVLRS LERIGDHARN ISELVIYLVR GTDVRHMGLK RMKEEVEGTS GETANVPGDA DDK
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